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Cluster: A112.bin_6_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A112_contig_2717 A112_contig_2717_209 221388 223400 - GH42
CAZyme A112_contig_2717 A112_contig_2717_210 223441 225555 - GH35
CAZyme A112_contig_2717 A112_contig_2717_211 225556 227277 - GH53
TF A112_contig_2717 A112_contig_2717_212 227295 228272 - LacI
STP A112_contig_2717 A112_contig_2717_213 228453 230072 - SBP_bac_1
TC A112_contig_2717 A112_contig_2717_214 230112 231035 - 3.A.1.1.29
TC A112_contig_2717 A112_contig_2717_215 231050 231979 - 3.A.1.1.10
CAZyme A112_contig_2717 A112_contig_2717_216 232197 233696 - GH51_1
Gene ID: A112_contig_2717_209
Type: CAZyme
Location: 221388 - 223400 (-)
Gene ID: A112_contig_2717_210
Type: CAZyme
Location: 223441 - 225555 (-)
Gene ID: A112_contig_2717_211
Type: CAZyme
Location: 225556 - 227277 (-)
Gene ID: A112_contig_2717_212
Type: TF
Location: 227295 - 228272 (-)
Gene ID: A112_contig_2717_213
Type: STP
Location: 228453 - 230072 (-)
Gene ID: A112_contig_2717_214
Type: TC
Location: 230112 - 231035 (-)
Gene ID: A112_contig_2717_215
Type: TC
Location: 231050 - 231979 (-)
Gene ID: A112_contig_2717_216
Type: CAZyme
Location: 232197 - 233696 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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