Cluster: A112.bin_6_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_1248 | A112_contig_1248_462 | 543678 | 544250 | - | 2.A.115.2.14 |
| TC | A112_contig_1248 | A112_contig_1248_463 | 544352 | 544852 | - | 3.A.1.21.1 |
| TC | A112_contig_1248 | A112_contig_1248_464 | 544912 | 545967 | - | 3.A.1.21.2 |
| STP | A112_contig_1248 | A112_contig_1248_465 | 546121 | 546714 | - | TetR_N |
| CAZyme | A112_contig_1248 | A112_contig_1248_466 | 546864 | 548987 | - | GH2 |
| TC | A112_contig_1248 | A112_contig_1248_467 | 549243 | 549827 | - | 3.A.1.3.17 |
| TC | A112_contig_1248 | A112_contig_1248_468 | 549840 | 550220 | - | 3.A.1.3.25 |
Gene ID: A112_contig_1248_462
Type: TC
Location: 543678 - 544250 (-)
Type: TC
Location: 543678 - 544250 (-)
Gene ID: A112_contig_1248_463
Type: TC
Location: 544352 - 544852 (-)
Type: TC
Location: 544352 - 544852 (-)
Gene ID: A112_contig_1248_464
Type: TC
Location: 544912 - 545967 (-)
Type: TC
Location: 544912 - 545967 (-)
Gene ID: A112_contig_1248_465
Type: STP
Location: 546121 - 546714 (-)
Type: STP
Location: 546121 - 546714 (-)
Gene ID: A112_contig_1248_466
Type: CAZyme
Location: 546864 - 548987 (-)
Type: CAZyme
Location: 546864 - 548987 (-)
Gene ID: A112_contig_1248_467
Type: TC
Location: 549243 - 549827 (-)
Type: TC
Location: 549243 - 549827 (-)
Gene ID: A112_contig_1248_468
Type: TC
Location: 549840 - 550220 (-)
Type: TC
Location: 549840 - 550220 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.