Cluster: A112.bin_6_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_00338
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_1248 | A112_contig_1248_451 | 529474 | 530406 | - | 3.A.1.1.29 |
| TC | A112_contig_1248 | A112_contig_1248_452 | 530426 | 531340 | - | 3.A.1.1.9 |
| TF | A112_contig_1248 | A112_contig_1248_453 | 531359 | 532372 | - | LacI |
| CAZyme | A112_contig_1248 | A112_contig_1248_454 | 532830 | 534899 | - | GH31_4 |
| CAZyme | A112_contig_1248 | A112_contig_1248_455 | 534913 | 537246 | - | GH74 | GH74 |
| TC | A112_contig_1248 | A112_contig_1248_456 | 537365 | 538714 | - | 2.A.66.1.33 |
Gene ID: A112_contig_1248_451
Type: TC
Location: 529474 - 530406 (-)
Type: TC
Location: 529474 - 530406 (-)
Gene ID: A112_contig_1248_452
Type: TC
Location: 530426 - 531340 (-)
Type: TC
Location: 530426 - 531340 (-)
Gene ID: A112_contig_1248_453
Type: TF
Location: 531359 - 532372 (-)
Type: TF
Location: 531359 - 532372 (-)
Gene ID: A112_contig_1248_454
Type: CAZyme
Location: 532830 - 534899 (-)
Type: CAZyme
Location: 532830 - 534899 (-)
Gene ID: A112_contig_1248_455
Type: CAZyme
Location: 534913 - 537246 (-)
Type: CAZyme
Location: 534913 - 537246 (-)
Gene ID: A112_contig_1248_456
Type: TC
Location: 537365 - 538714 (-)
Type: TC
Location: 537365 - 538714 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.