dbCAN HGM

Cluster: A112.bin_6_CGC28

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	A112_contig_1248	A112_contig_1248_383	448238	450019	-	GH13_36
TC	A112_contig_1248	A112_contig_1248_384	450103	450984	-	3.A.1.1.27
TC	A112_contig_1248	A112_contig_1248_385	450984	452360	-	3.A.1.1.27
pfam	A112_contig_1248	A112_contig_1248_386	452519	453868	-	SBP_bac_8
CAZyme	A112_contig_1248	A112_contig_1248_387	453949	455445	-	GH77
TF	A112_contig_1248	A112_contig_1248_388	455731	456756	+	LacI
TC	A112_contig_1248	A112_contig_1248_389	456837	458903	-	1.B.52.2.2
TC	A112_contig_1248	A112_contig_1248_390	459273	460742	-	2.A.22.5.3
TC	A112_contig_1248	A112_contig_1248_391	461030	462808	-	1.B.52.2.1
TC	A112_contig_1248	A112_contig_1248_392	463352	465178	-	3.A.16.1.1

Gene ID: A112_contig_1248_383
Type: CAZyme
Location: 448238 - 450019 (-)

Gene ID: A112_contig_1248_384
Type: TC
Location: 450103 - 450984 (-)

Gene ID: A112_contig_1248_385
Type: TC
Location: 450984 - 452360 (-)

Gene ID: A112_contig_1248_386
Type: pfam
Location: 452519 - 453868 (-)

Gene ID: A112_contig_1248_387
Type: CAZyme
Location: 453949 - 455445 (-)

Gene ID: A112_contig_1248_388
Type: TF
Location: 455731 - 456756 (+)

Gene ID: A112_contig_1248_389
Type: TC
Location: 456837 - 458903 (-)

Gene ID: A112_contig_1248_390
Type: TC
Location: 459273 - 460742 (-)

Gene ID: A112_contig_1248_391
Type: TC
Location: 461030 - 462808 (-)

Gene ID: A112_contig_1248_392
Type: TC
Location: 463352 - 465178 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.