Cluster: A112.bin_6_CGC25
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_1248 | A112_contig_1248_268 | 320256 | 321452 | - | GT4 |
| pfam | A112_contig_1248 | A112_contig_1248_269 | 321467 | 322414 | - | Glycos_transf_2 |
| CAZyme | A112_contig_1248 | A112_contig_1248_270 | 322418 | 323692 | - | GT4 |
| NULL(UNKNOWN) | A112_contig_1248 | A112_contig_1248_271 | 323670 | 324926 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A112_contig_1248 | A112_contig_1248_272 | 324942 | 326153 | - | GT4 |
| CAZyme | A112_contig_1248 | A112_contig_1248_273 | 326163 | 326915 | - | GT2 |
| pfam | A112_contig_1248 | A112_contig_1248_274 | 326927 | 327835 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| TC | A112_contig_1248 | A112_contig_1248_275 | 327832 | 328458 | - | 9.B.18.1.3 |
| TC | A112_contig_1248 | A112_contig_1248_276 | 328478 | 330340 | - | 9.B.18.2.1 |
Gene ID: A112_contig_1248_268
Type: CAZyme
Location: 320256 - 321452 (-)
Type: CAZyme
Location: 320256 - 321452 (-)
Gene ID: A112_contig_1248_269
Type: pfam
Location: 321467 - 322414 (-)
Type: pfam
Location: 321467 - 322414 (-)
Gene ID: A112_contig_1248_270
Type: CAZyme
Location: 322418 - 323692 (-)
Type: CAZyme
Location: 322418 - 323692 (-)
Gene ID: A112_contig_1248_271
Type:
Location: 323670 - 324926 (-)
Type:
Location: 323670 - 324926 (-)
Gene ID: A112_contig_1248_272
Type: CAZyme
Location: 324942 - 326153 (-)
Type: CAZyme
Location: 324942 - 326153 (-)
Gene ID: A112_contig_1248_273
Type: CAZyme
Location: 326163 - 326915 (-)
Type: CAZyme
Location: 326163 - 326915 (-)
Gene ID: A112_contig_1248_274
Type: pfam
Location: 326927 - 327835 (-)
Type: pfam
Location: 326927 - 327835 (-)
Gene ID: A112_contig_1248_275
Type: TC
Location: 327832 - 328458 (-)
Type: TC
Location: 327832 - 328458 (-)
Gene ID: A112_contig_1248_276
Type: TC
Location: 328478 - 330340 (-)
Type: TC
Location: 328478 - 330340 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.