Cluster: A112.bin_6_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_00067
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_1332 | A112_contig_1332_970 | 1053584 | 1055062 | - | GH13_18 |
| CAZyme | A112_contig_1332 | A112_contig_1332_971 | 1055052 | 1057859 | - | GH36 |
| TC | A112_contig_1332 | A112_contig_1332_972 | 1057881 | 1058723 | - | 3.A.1.1.28 |
| TC | A112_contig_1332 | A112_contig_1332_973 | 1058720 | 1059595 | - | 3.A.1.1.45 |
| TC | A112_contig_1332 | A112_contig_1332_974 | 1059592 | 1060893 | - | 3.A.1.1.28 |
Gene ID: A112_contig_1332_970
Type: CAZyme
Location: 1053584 - 1055062 (-)
Type: CAZyme
Location: 1053584 - 1055062 (-)
Gene ID: A112_contig_1332_971
Type: CAZyme
Location: 1055052 - 1057859 (-)
Type: CAZyme
Location: 1055052 - 1057859 (-)
Gene ID: A112_contig_1332_972
Type: TC
Location: 1057881 - 1058723 (-)
Type: TC
Location: 1057881 - 1058723 (-)
Gene ID: A112_contig_1332_973
Type: TC
Location: 1058720 - 1059595 (-)
Type: TC
Location: 1058720 - 1059595 (-)
Gene ID: A112_contig_1332_974
Type: TC
Location: 1059592 - 1060893 (-)
Type: TC
Location: 1059592 - 1060893 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.