Cluster: A112.bin_6_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: A112.bin_6
- CGC Family ID: CGCFAM_00037
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_1332 | A112_contig_1332_719 | 774823 | 775662 | - | 3.A.1.1.27 |
| TC | A112_contig_1332 | A112_contig_1332_720 | 775659 | 776975 | - | 3.A.1.1.27 |
| pfam | A112_contig_1332 | A112_contig_1332_721 | 777007 | 778491 | - | SBP_bac_8 |
| CAZyme | A112_contig_1332 | A112_contig_1332_722 | 778494 | 780212 | - | CBM34 | GH13_20 |
Gene ID: A112_contig_1332_719
Type: TC
Location: 774823 - 775662 (-)
Type: TC
Location: 774823 - 775662 (-)
Gene ID: A112_contig_1332_720
Type: TC
Location: 775659 - 776975 (-)
Type: TC
Location: 775659 - 776975 (-)
Gene ID: A112_contig_1332_721
Type: pfam
Location: 777007 - 778491 (-)
Type: pfam
Location: 777007 - 778491 (-)
Gene ID: A112_contig_1332_722
Type: CAZyme
Location: 778494 - 780212 (-)
Type: CAZyme
Location: 778494 - 780212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.