Cluster: A112.bin_6_CGC10
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_1332 | A112_contig_1332_684 | 736288 | 737397 | - | 4.D.2.1.5 |
| NULL(UNKNOWN) | A112_contig_1332 | A112_contig_1332_685 | 737357 | 737920 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A112_contig_1332 | A112_contig_1332_686 | 737942 | 738973 | - | GT2 |
| pfam | A112_contig_1332 | A112_contig_1332_687 | 739200 | 740681 | - | SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C |
| pfam | A112_contig_1332 | A112_contig_1332_688 | 740748 | 741689 | - | DAGK_cat | YegS_C |
| CAZyme | A112_contig_1332 | A112_contig_1332_689 | 741699 | 743213 | - | GH77 |
| TF | A112_contig_1332 | A112_contig_1332_690 | 743233 | 744276 | - | LacI |
| TC | A112_contig_1332 | A112_contig_1332_691 | 744507 | 745769 | + | 2.A.49.9.2 |
| pfam | A112_contig_1332 | A112_contig_1332_692 | 745750 | 746175 | - | DUF1284 |
| TC | A112_contig_1332 | A112_contig_1332_693 | 746216 | 746770 | - | 3.A.1.25.5 |
Gene ID: A112_contig_1332_684
Type: TC
Location: 736288 - 737397 (-)
Type: TC
Location: 736288 - 737397 (-)
Gene ID: A112_contig_1332_685
Type:
Location: 737357 - 737920 (-)
Type:
Location: 737357 - 737920 (-)
Gene ID: A112_contig_1332_686
Type: CAZyme
Location: 737942 - 738973 (-)
Type: CAZyme
Location: 737942 - 738973 (-)
Gene ID: A112_contig_1332_687
Type: pfam
Location: 739200 - 740681 (-)
Type: pfam
Location: 739200 - 740681 (-)
Gene ID: A112_contig_1332_688
Type: pfam
Location: 740748 - 741689 (-)
Type: pfam
Location: 740748 - 741689 (-)
Gene ID: A112_contig_1332_689
Type: CAZyme
Location: 741699 - 743213 (-)
Type: CAZyme
Location: 741699 - 743213 (-)
Gene ID: A112_contig_1332_690
Type: TF
Location: 743233 - 744276 (-)
Type: TF
Location: 743233 - 744276 (-)
Gene ID: A112_contig_1332_691
Type: TC
Location: 744507 - 745769 (+)
Type: TC
Location: 744507 - 745769 (+)
Gene ID: A112_contig_1332_692
Type: pfam
Location: 745750 - 746175 (-)
Type: pfam
Location: 745750 - 746175 (-)
Gene ID: A112_contig_1332_693
Type: TC
Location: 746216 - 746770 (-)
Type: TC
Location: 746216 - 746770 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.