Cluster: A112.bin_11_CGC8
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 6
- Substrate:
- Genome ID: A112.bin_11
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_1095 | A112_contig_1095_339 | 396603 | 397277 | + | 9.B.18.1.2 |
| pfam | A112_contig_1095 | A112_contig_1095_340 | 397256 | 397900 | + | PglD_N |
| CAZyme | A112_contig_1095 | A112_contig_1095_341 | 398058 | 399164 | + | GT4 |
| pfam | A112_contig_1095 | A112_contig_1095_342 | 399237 | 400355 | + | EpsG |
| CAZyme | A112_contig_1095 | A112_contig_1095_343 | 400425 | 401477 | + | GT2 |
| CAZyme | A112_contig_1095 | A112_contig_1095_344 | 401509 | 402639 | + | GT4 |
| CAZyme | A112_contig_1095 | A112_contig_1095_345 | 402641 | 403540 | + | GT2 |
| CAZyme | A112_contig_1095 | A112_contig_1095_346 | 403672 | 404358 | + | GT32 |
| CAZyme | A112_contig_1095 | A112_contig_1095_347 | 404368 | 405579 | + | GT4 |
Gene ID: A112_contig_1095_339
Type: TC
Location: 396603 - 397277 (+)
Type: TC
Location: 396603 - 397277 (+)
Gene ID: A112_contig_1095_340
Type: pfam
Location: 397256 - 397900 (+)
Type: pfam
Location: 397256 - 397900 (+)
Gene ID: A112_contig_1095_341
Type: CAZyme
Location: 398058 - 399164 (+)
Type: CAZyme
Location: 398058 - 399164 (+)
Gene ID: A112_contig_1095_342
Type: pfam
Location: 399237 - 400355 (+)
Type: pfam
Location: 399237 - 400355 (+)
Gene ID: A112_contig_1095_343
Type: CAZyme
Location: 400425 - 401477 (+)
Type: CAZyme
Location: 400425 - 401477 (+)
Gene ID: A112_contig_1095_344
Type: CAZyme
Location: 401509 - 402639 (+)
Type: CAZyme
Location: 401509 - 402639 (+)
Gene ID: A112_contig_1095_345
Type: CAZyme
Location: 402641 - 403540 (+)
Type: CAZyme
Location: 402641 - 403540 (+)
Gene ID: A112_contig_1095_346
Type: CAZyme
Location: 403672 - 404358 (+)
Type: CAZyme
Location: 403672 - 404358 (+)
Gene ID: A112_contig_1095_347
Type: CAZyme
Location: 404368 - 405579 (+)
Type: CAZyme
Location: 404368 - 405579 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp003150135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_1095_339 | vegan > omnivore | 1.39916 | 0.02517 |
| A112_contig_1095_340 | vegan > omnivore | 1.42349 | 0.02517 |
| A112_contig_1095_342 | vegan > omnivore | 1.35937 | 0.02517 |
| A112_contig_1095_344 | vegan > omnivore | 1.48697 | 0.02517 |
| A112_contig_1095_346 | vegan > omnivore | 1.27712 | 0.02517 |