Cluster: A112.bin_11_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_11
- CGC Family ID: CGCFAM_00132
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_1095 | A112_contig_1095_135 | 161493 | 162713 | + | GT4 |
| pfam | A112_contig_1095 | A112_contig_1095_136 | 162695 | 163912 | + | Wzy_C |
| CAZyme | A112_contig_1095 | A112_contig_1095_137 | 163890 | 165035 | + | GT4 |
| pfam | A112_contig_1095 | A112_contig_1095_138 | 165032 | 165556 | + | Hexapep |
| pfam | A112_contig_1095 | A112_contig_1095_139 | 165531 | 166832 | + | Polysacc_synt | Polysacc_synt_3 |
| TC | A112_contig_1095 | A112_contig_1095_140 | 166911 | 167939 | + | 9.B.18.2.1 |
Gene ID: A112_contig_1095_135
Type: CAZyme
Location: 161493 - 162713 (+)
Type: CAZyme
Location: 161493 - 162713 (+)
Gene ID: A112_contig_1095_136
Type: pfam
Location: 162695 - 163912 (+)
Type: pfam
Location: 162695 - 163912 (+)
Gene ID: A112_contig_1095_137
Type: CAZyme
Location: 163890 - 165035 (+)
Type: CAZyme
Location: 163890 - 165035 (+)
Gene ID: A112_contig_1095_138
Type: pfam
Location: 165032 - 165556 (+)
Type: pfam
Location: 165032 - 165556 (+)
Gene ID: A112_contig_1095_139
Type: pfam
Location: 165531 - 166832 (+)
Type: pfam
Location: 165531 - 166832 (+)
Gene ID: A112_contig_1095_140
Type: TC
Location: 166911 - 167939 (+)
Type: TC
Location: 166911 - 167939 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp003150135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_1095_135 | vegan > omnivore | 1.01434 | 0.02517 |
| A112_contig_1095_136 | vegan > omnivore | 1.42081 | 0.02517 |