Cluster: A112.bin_11_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_1669 | A112_contig_1669_32 | 33615 | 34316 | - | 3.A.1.125.2 |
| pfam | A112_contig_1669 | A112_contig_1669_33 | 34585 | 35613 | - | 2-Hacid_dh_C |
| NULL(UNKNOWN) | A112_contig_1669 | A112_contig_1669_34 | 36368 | 37147 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A112_contig_1669 | A112_contig_1669_35 | 37144 | 38259 | - | GT4 |
| pfam | A112_contig_1669 | A112_contig_1669_36 | 38587 | 39228 | + | DUF308 | DUF308 | DUF308 |
| pfam | A112_contig_1669 | A112_contig_1669_37 | 39234 | 41366 | + | SecD_SecF_C | MMPL | MMPL |
| TC | A112_contig_1669 | A112_contig_1669_38 | 41368 | 43536 | + | 9.B.74.1.4 |
Gene ID: A112_contig_1669_32
Type: TC
Location: 33615 - 34316 (-)
Type: TC
Location: 33615 - 34316 (-)
Gene ID: A112_contig_1669_33
Type: pfam
Location: 34585 - 35613 (-)
Type: pfam
Location: 34585 - 35613 (-)
Gene ID: A112_contig_1669_34
Type:
Location: 36368 - 37147 (-)
Type:
Location: 36368 - 37147 (-)
Gene ID: A112_contig_1669_35
Type: CAZyme
Location: 37144 - 38259 (-)
Type: CAZyme
Location: 37144 - 38259 (-)
Gene ID: A112_contig_1669_36
Type: pfam
Location: 38587 - 39228 (+)
Type: pfam
Location: 38587 - 39228 (+)
Gene ID: A112_contig_1669_37
Type: pfam
Location: 39234 - 41366 (+)
Type: pfam
Location: 39234 - 41366 (+)
Gene ID: A112_contig_1669_38
Type: TC
Location: 41368 - 43536 (+)
Type: TC
Location: 41368 - 43536 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp003150135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_1669_33 | vegan > omnivore | 1.78939 | 0.02517 |
| A112_contig_1669_34 | vegan > omnivore | 1.69624 | 0.02517 |
| A112_contig_1669_35 | vegan > omnivore | 1.81759 | 0.02517 |
| A112_contig_1669_36 | vegan > omnivore | 1.58305 | 0.02517 |