Cluster: A112.bin_11_CGC23
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_9740 | A112_contig_9740_212 | 313036 | 315585 | + | GH78 |
| pfam | A112_contig_9740 | A112_contig_9740_213 | 316858 | 318573 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| pfam | A112_contig_9740 | A112_contig_9740_214 | 319210 | 321726 | + | DEAD_2 | HBB | Helicase_C_2 |
| TC | A112_contig_9740 | A112_contig_9740_215 | 322012 | 322848 | - | 3.A.1.24.5 |
| TC | A112_contig_9740 | A112_contig_9740_216 | 322942 | 323619 | - | 3.A.1.24.1 |
| TC | A112_contig_9740 | A112_contig_9740_217 | 323622 | 324611 | - | 3.A.1.24.1 |
| NULL(UNKNOWN) | A112_contig_9740 | A112_contig_9740_218 | 324637 | 324759 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A112_contig_9740 | A112_contig_9740_219 | 324756 | 324845 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A112_contig_9740 | A112_contig_9740_220 | 325658 | 326353 | - | 1.C.82.1.1 |
Gene ID: A112_contig_9740_212
Type: CAZyme
Location: 313036 - 315585 (+)
Type: CAZyme
Location: 313036 - 315585 (+)
Gene ID: A112_contig_9740_213
Type: pfam
Location: 316858 - 318573 (+)
Type: pfam
Location: 316858 - 318573 (+)
Gene ID: A112_contig_9740_214
Type: pfam
Location: 319210 - 321726 (+)
Type: pfam
Location: 319210 - 321726 (+)
Gene ID: A112_contig_9740_215
Type: TC
Location: 322012 - 322848 (-)
Type: TC
Location: 322012 - 322848 (-)
Gene ID: A112_contig_9740_216
Type: TC
Location: 322942 - 323619 (-)
Type: TC
Location: 322942 - 323619 (-)
Gene ID: A112_contig_9740_217
Type: TC
Location: 323622 - 324611 (-)
Type: TC
Location: 323622 - 324611 (-)
Gene ID: A112_contig_9740_218
Type:
Location: 324637 - 324759 (-)
Type:
Location: 324637 - 324759 (-)
Gene ID: A112_contig_9740_219
Type:
Location: 324756 - 324845 (-)
Type:
Location: 324756 - 324845 (-)
Gene ID: A112_contig_9740_220
Type: TC
Location: 325658 - 326353 (-)
Type: TC
Location: 325658 - 326353 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp003150135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_9740_212 | vegan > omnivore | 1.57344 | 0.02517 |
| A112_contig_9740_213 | vegan > omnivore | 1.04341 | 0.02517 |
| A112_contig_9740_214 | vegan > omnivore | 1.08932 | 0.02517 |
| A112_contig_9740_216 | vegetarian > omnivore | 1.74450 | 0.00139 |
| A112_contig_9740_218 | vegan > omnivore | 1.99376 | 0.02517 |
| A112_contig_9740_219 | vegan > omnivore | 2.17534 | 0.02517 |
| A112_contig_9740_220 | vegetarian > vegan | 1.36774 | 0.00364 |