Cluster: A112.bin_11_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: A112.bin_11
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_9740 | A112_contig_9740_187 | 272012 | 272602 | - | 2.A.88.3.1 |
| CAZyme | A112_contig_9740 | A112_contig_9740_188 | 273797 | 275908 | + | GH13_9 |
| pfam | A112_contig_9740 | A112_contig_9740_189 | 275913 | 277097 | + | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| pfam | A112_contig_9740 | A112_contig_9740_190 | 277111 | 278241 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | A112_contig_9740 | A112_contig_9740_191 | 278731 | 280230 | + | GT5 |
Gene ID: A112_contig_9740_187
Type: TC
Location: 272012 - 272602 (-)
Type: TC
Location: 272012 - 272602 (-)
Gene ID: A112_contig_9740_188
Type: CAZyme
Location: 273797 - 275908 (+)
Type: CAZyme
Location: 273797 - 275908 (+)
Gene ID: A112_contig_9740_189
Type: pfam
Location: 275913 - 277097 (+)
Type: pfam
Location: 275913 - 277097 (+)
Gene ID: A112_contig_9740_190
Type: pfam
Location: 277111 - 278241 (+)
Type: pfam
Location: 277111 - 278241 (+)
Gene ID: A112_contig_9740_191
Type: CAZyme
Location: 278731 - 280230 (+)
Type: CAZyme
Location: 278731 - 280230 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp003150135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_9740_187 | vegan > omnivore | 1.99621 | 0.02517 |
| A112_contig_9740_190 | vegan > omnivore | 1.12755 | 0.02517 |