Cluster: A112.bin_11_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_11
- CGC Family ID: CGCFAM_06563
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_8170 | A112_contig_8170_120 | 129945 | 132056 | - | CBM67 | GH78 |
| pfam | A112_contig_8170 | A112_contig_8170_121 | 132201 | 133166 | - | Radical_SAM | Radical_SAM_C |
| pfam | A112_contig_8170 | A112_contig_8170_122 | 134245 | 135039 | + | ABC_trans_CmpB |
| TC | A112_contig_8170 | A112_contig_8170_123 | 135136 | 136440 | + | 2.A.38.4.1 |
| TC | A112_contig_8170 | A112_contig_8170_124 | 136505 | 137215 | + | 2.A.38.4.6 |
Gene ID: A112_contig_8170_120
Type: CAZyme
Location: 129945 - 132056 (-)
Type: CAZyme
Location: 129945 - 132056 (-)
Gene ID: A112_contig_8170_121
Type: pfam
Location: 132201 - 133166 (-)
Type: pfam
Location: 132201 - 133166 (-)
Gene ID: A112_contig_8170_122
Type: pfam
Location: 134245 - 135039 (+)
Type: pfam
Location: 134245 - 135039 (+)
Gene ID: A112_contig_8170_123
Type: TC
Location: 135136 - 136440 (+)
Type: TC
Location: 135136 - 136440 (+)
Gene ID: A112_contig_8170_124
Type: TC
Location: 136505 - 137215 (+)
Type: TC
Location: 136505 - 137215 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp003150135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_8170_120 | vegan > omnivore | 1.59482 | 0.02517 |
| A112_contig_8170_121 | vegan > omnivore | 1.80642 | 0.02517 |
| A112_contig_8170_122 | vegan > omnivore | 1.50046 | 0.02517 |
| A112_contig_8170_123 | vegan > omnivore | 1.26841 | 0.02517 |
| A112_contig_8170_124 | vegan > omnivore | 1.23620 | 0.02517 |