Cluster: A112.bin_11_CGC16
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_2980 | A112_contig_2980_184 | 212951 | 214081 | - | 3.A.1.2.10 |
| TC | A112_contig_2980 | A112_contig_2980_185 | 214074 | 215663 | - | 3.A.1.2.17 |
| pfam | A112_contig_2980 | A112_contig_2980_186 | 215828 | 217027 | - | Bmp |
| TC | A112_contig_2980 | A112_contig_2980_187 | 217601 | 220057 | + | 3.A.1.135.5 |
| pfam | A112_contig_2980 | A112_contig_2980_188 | 220086 | 220667 | + | DUF1854 |
| TC | A112_contig_2980 | A112_contig_2980_189 | 220686 | 222905 | + | 3.A.1.106.2 |
| TC | A112_contig_2980 | A112_contig_2980_190 | 222997 | 223746 | - | 3.A.1.125.1 |
| pfam | A112_contig_2980 | A112_contig_2980_191 | 223759 | 226137 | - | FtsX |
| CAZyme | A112_contig_2980 | A112_contig_2980_192 | 226421 | 227923 | + | GH28 |
| CAZyme | A112_contig_2980 | A112_contig_2980_193 | 227952 | 229895 | + | GH36 |
Gene ID: A112_contig_2980_184
Type: TC
Location: 212951 - 214081 (-)
Type: TC
Location: 212951 - 214081 (-)
Gene ID: A112_contig_2980_185
Type: TC
Location: 214074 - 215663 (-)
Type: TC
Location: 214074 - 215663 (-)
Gene ID: A112_contig_2980_186
Type: pfam
Location: 215828 - 217027 (-)
Type: pfam
Location: 215828 - 217027 (-)
Gene ID: A112_contig_2980_187
Type: TC
Location: 217601 - 220057 (+)
Type: TC
Location: 217601 - 220057 (+)
Gene ID: A112_contig_2980_188
Type: pfam
Location: 220086 - 220667 (+)
Type: pfam
Location: 220086 - 220667 (+)
Gene ID: A112_contig_2980_189
Type: TC
Location: 220686 - 222905 (+)
Type: TC
Location: 220686 - 222905 (+)
Gene ID: A112_contig_2980_190
Type: TC
Location: 222997 - 223746 (-)
Type: TC
Location: 222997 - 223746 (-)
Gene ID: A112_contig_2980_191
Type: pfam
Location: 223759 - 226137 (-)
Type: pfam
Location: 223759 - 226137 (-)
Gene ID: A112_contig_2980_192
Type: CAZyme
Location: 226421 - 227923 (+)
Type: CAZyme
Location: 226421 - 227923 (+)
Gene ID: A112_contig_2980_193
Type: CAZyme
Location: 227952 - 229895 (+)
Type: CAZyme
Location: 227952 - 229895 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp003150135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_2980_186 | vegetarian > omnivore | 1.09350 | 0.03075 |
| A112_contig_2980_187 | vegan > omnivore | 1.29528 | 0.02517 |
| A112_contig_2980_188 | vegan > omnivore | 1.37081 | 0.02517 |
| A112_contig_2980_189 | vegan > omnivore | 1.44362 | 0.02517 |
| A112_contig_2980_190 | vegan > omnivore | 1.77826 | 0.02517 |
| A112_contig_2980_191 | vegan > omnivore | 1.43562 | 0.02517 |
| A112_contig_2980_192 | vegan > omnivore | 1.47193 | 0.02517 |
| A112_contig_2980_193 | vegan > omnivore | 1.58839 | 0.02517 |