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Cluster: A112.bin_11_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A112_contig_2980 A112_contig_2980_114 130662 132755 - GH110
TC A112_contig_2980 A112_contig_2980_115 132982 134514 + 3.A.1.2.1
TC A112_contig_2980 A112_contig_2980_116 134531 135541 + 3.A.1.2.4
NULL(UNKNOWN) A112_contig_2980 A112_contig_2980_117 135598 136842 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A112_contig_2980 A112_contig_2980_118 136839 137894 + BPD_transp_2
CAZyme A112_contig_2980 A112_contig_2980_119 137891 139687 + GH3
pfam A112_contig_2980 A112_contig_2980_120 140324 141157 + ATP_bind_3
CAZyme A112_contig_2980 A112_contig_2980_121 141239 142354 - GH3
pfam A112_contig_2980 A112_contig_2980_122 142354 143643 - PFK
pfam A112_contig_2980 A112_contig_2980_123 143675 144391 - Exo_endo_phos
CAZyme A112_contig_2980 A112_contig_2980_124 144431 145579 - GH1
pfam A112_contig_2980 A112_contig_2980_125 145602 145769 - Glyco_hydro_1
pfam A112_contig_2980 A112_contig_2980_126 145834 146565 - PseudoU_synth_2
CAZyme A112_contig_2980 A112_contig_2980_127 146670 151349 - CBM67 | CBM67 | GH78
TC A112_contig_2980 A112_contig_2980_128 151483 152139 - 4.F.1.1.7
Gene ID: A112_contig_2980_114
Type: CAZyme
Location: 130662 - 132755 (-)
Gene ID: A112_contig_2980_115
Type: TC
Location: 132982 - 134514 (+)
Gene ID: A112_contig_2980_116
Type: TC
Location: 134531 - 135541 (+)
Gene ID: A112_contig_2980_117
Type:
Location: 135598 - 136842 (+)
Gene ID: A112_contig_2980_118
Type: pfam
Location: 136839 - 137894 (+)
Gene ID: A112_contig_2980_119
Type: CAZyme
Location: 137891 - 139687 (+)
Gene ID: A112_contig_2980_120
Type: pfam
Location: 140324 - 141157 (+)
Gene ID: A112_contig_2980_121
Type: CAZyme
Location: 141239 - 142354 (-)
Gene ID: A112_contig_2980_122
Type: pfam
Location: 142354 - 143643 (-)
Gene ID: A112_contig_2980_123
Type: pfam
Location: 143675 - 144391 (-)
Gene ID: A112_contig_2980_124
Type: CAZyme
Location: 144431 - 145579 (-)
Gene ID: A112_contig_2980_125
Type: pfam
Location: 145602 - 145769 (-)
Gene ID: A112_contig_2980_126
Type: pfam
Location: 145834 - 146565 (-)
Gene ID: A112_contig_2980_127
Type: CAZyme
Location: 146670 - 151349 (-)
Gene ID: A112_contig_2980_128
Type: TC
Location: 151483 - 152139 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-448
→
Species
CAG-448 sp003150135

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A112_contig_2980_114 vegan > omnivore 1.38341 0.02517
A112_contig_2980_115 vegan > omnivore 1.27830 0.02517
A112_contig_2980_116 vegan > omnivore 1.30999 0.02517
A112_contig_2980_117 vegan > omnivore 1.34208 0.02517
A112_contig_2980_121 vegan > omnivore 1.67387 0.02517
A112_contig_2980_123 vegan > omnivore 1.51348 0.02517
A112_contig_2980_124 vegan > omnivore 1.57506 0.02517
A112_contig_2980_125 vegan > omnivore 1.52440 0.02517
A112_contig_2980_126 vegan > omnivore 1.48015 0.02517
A112_contig_2980_127 vegan > omnivore 1.26507 0.02517
A112_contig_2980_128 vegan > omnivore 1.56192 0.02517

🧭 Explore Read Mapping of CGC

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