Cluster: A112.bin_11_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_2980 | A112_contig_2980_92 | 104432 | 107140 | + | 3.A.3.2.21 |
| TF | A112_contig_2980 | A112_contig_2980_93 | 107313 | 108404 | - | 0037176 |
| pfam | A112_contig_2980 | A112_contig_2980_94 | 108572 | 109318 | - | Methyltrans_RNA | PUA_4 |
| TC | A112_contig_2980 | A112_contig_2980_95 | 109592 | 110506 | - | 3.A.11.1.4 |
| CAZyme | A112_contig_2980 | A112_contig_2980_96 | 110523 | 112979 | - | GH78 |
Gene ID: A112_contig_2980_92
Type: TC
Location: 104432 - 107140 (+)
Type: TC
Location: 104432 - 107140 (+)
Gene ID: A112_contig_2980_93
Type: TF
Location: 107313 - 108404 (-)
Type: TF
Location: 107313 - 108404 (-)
Gene ID: A112_contig_2980_94
Type: pfam
Location: 108572 - 109318 (-)
Type: pfam
Location: 108572 - 109318 (-)
Gene ID: A112_contig_2980_95
Type: TC
Location: 109592 - 110506 (-)
Type: TC
Location: 109592 - 110506 (-)
Gene ID: A112_contig_2980_96
Type: CAZyme
Location: 110523 - 112979 (-)
Type: CAZyme
Location: 110523 - 112979 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp003150135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_2980_92 | vegetarian > vegan | 1.25757 | 0.00364 |
| A112_contig_2980_94 | vegan > omnivore | 1.73226 | 0.02517 |
| A112_contig_2980_95 | vegan > omnivore | 1.04286 | 0.02517 |
| A112_contig_2980_96 | vegan > omnivore | 1.67001 | 0.02517 |