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Cluster: A112.bin_11_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A112_contig_1095 A112_contig_1095_2 4242 5627 + GH28
NULL(UNKNOWN) A112_contig_1095 A112_contig_1095_3 5807 6199 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A112_contig_1095 A112_contig_1095_4 6243 7265 - GH29
TC A112_contig_1095 A112_contig_1095_5 7695 8687 + 3.A.1.23.5
pfam A112_contig_1095 A112_contig_1095_6 8710 9465 + CbiQ
TC A112_contig_1095 A112_contig_1095_7 9590 10330 + 3.A.1.23.5
TC A112_contig_1095 A112_contig_1095_8 10541 11881 - 2.A.66.1.28
Gene ID: A112_contig_1095_2
Type: CAZyme
Location: 4242 - 5627 (+)
Gene ID: A112_contig_1095_3
Type:
Location: 5807 - 6199 (-)
Gene ID: A112_contig_1095_4
Type: CAZyme
Location: 6243 - 7265 (-)
Gene ID: A112_contig_1095_5
Type: TC
Location: 7695 - 8687 (+)
Gene ID: A112_contig_1095_6
Type: pfam
Location: 8710 - 9465 (+)
Gene ID: A112_contig_1095_7
Type: TC
Location: 9590 - 10330 (+)
Gene ID: A112_contig_1095_8
Type: TC
Location: 10541 - 11881 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-448
→
Species
CAG-448 sp003150135

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A112_contig_1095_2 vegetarian > omnivore 1.07280 0.04248
A112_contig_1095_7 vegan > omnivore 1.05498 0.02517

🧭 Explore Read Mapping of CGC

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