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Cluster: A111.bin_55_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A111_contig_5370 A111_contig_5370_46 46599 48113 + GH29
CAZyme A111_contig_5370 A111_contig_5370_47 48192 50750 + GH3
sulfatase A111_contig_5370 A111_contig_5370_48 50966 51649 + S1_16
TC A111_contig_5370 A111_contig_5370_49 51718 52293 - 3.D.6.1.4
TC A111_contig_5370 A111_contig_5370_50 52358 52948 - 3.D.6.1.2
pfam A111_contig_5370 A111_contig_5370_51 52958 53518 - FMN_bind
TC A111_contig_5370 A111_contig_5370_52 53545 54486 - 3.D.6.1.1
TC A111_contig_5370 A111_contig_5370_53 54589 55938 - 3.D.6.1.1
TC A111_contig_5370 A111_contig_5370_54 55972 56829 - 3.D.6.1.2
Gene ID: A111_contig_5370_46
Type: CAZyme
Location: 46599 - 48113 (+)
Gene ID: A111_contig_5370_47
Type: CAZyme
Location: 48192 - 50750 (+)
Gene ID: A111_contig_5370_48
Type: sulfatase
Location: 50966 - 51649 (+)
Gene ID: A111_contig_5370_49
Type: TC
Location: 51718 - 52293 (-)
Gene ID: A111_contig_5370_50
Type: TC
Location: 52358 - 52948 (-)
Gene ID: A111_contig_5370_51
Type: pfam
Location: 52958 - 53518 (-)
Gene ID: A111_contig_5370_52
Type: TC
Location: 53545 - 54486 (-)
Gene ID: A111_contig_5370_53
Type: TC
Location: 54589 - 55938 (-)
Gene ID: A111_contig_5370_54
Type: TC
Location: 55972 - 56829 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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