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Cluster: A111.bin_51_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A111_contig_2214 A111_contig_2214_38 37032 38060 + GT2
TF A111_contig_2214 A111_contig_2214_39 38129 38737 - LexA_DNA_bind
pfam A111_contig_2214 A111_contig_2214_40 38929 39711 + PNP_UDP_1
TC A111_contig_2214 A111_contig_2214_41 39922 41106 - 3.A.1.12.9
TC A111_contig_2214 A111_contig_2214_42 41124 43073 - 3.A.1.12.6
TF A111_contig_2214 A111_contig_2214_43 43141 43785 - GntR
TC A111_contig_2214 A111_contig_2214_44 44153 45328 + 3.A.1.2.3
TC A111_contig_2214 A111_contig_2214_45 45496 46995 + 3.A.1.2.3
TC A111_contig_2214 A111_contig_2214_46 47014 48105 + 3.A.1.2.3
TF A111_contig_2214 A111_contig_2214_47 48227 49846 + HTH_AraC | HTH_AraC
TC A111_contig_2214 A111_contig_2214_48 49967 51781 + 8.A.59.2.1
STP A111_contig_2214 A111_contig_2214_49 51778 52731 + Peripla_BP_1
TC A111_contig_2214 A111_contig_2214_50 52688 53755 + 3.A.1.2.15
Gene ID: A111_contig_2214_38
Type: CAZyme
Location: 37032 - 38060 (+)
Gene ID: A111_contig_2214_39
Type: TF
Location: 38129 - 38737 (-)
Gene ID: A111_contig_2214_40
Type: pfam
Location: 38929 - 39711 (+)
Gene ID: A111_contig_2214_41
Type: TC
Location: 39922 - 41106 (-)
Gene ID: A111_contig_2214_42
Type: TC
Location: 41124 - 43073 (-)
Gene ID: A111_contig_2214_43
Type: TF
Location: 43141 - 43785 (-)
Gene ID: A111_contig_2214_44
Type: TC
Location: 44153 - 45328 (+)
Gene ID: A111_contig_2214_45
Type: TC
Location: 45496 - 46995 (+)
Gene ID: A111_contig_2214_46
Type: TC
Location: 47014 - 48105 (+)
Gene ID: A111_contig_2214_47
Type: TF
Location: 48227 - 49846 (+)
Gene ID: A111_contig_2214_48
Type: TC
Location: 49967 - 51781 (+)
Gene ID: A111_contig_2214_49
Type: STP
Location: 51778 - 52731 (+)
Gene ID: A111_contig_2214_50
Type: TC
Location: 52688 - 53755 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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