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Cluster: A111.bin_51_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A111_contig_2641 A111_contig_2641_243 278371 280215 - GH13_4
STP A111_contig_2641 A111_contig_2641_244 280212 281180 - PfkB
pfam A111_contig_2641 A111_contig_2641_245 281225 281920 - DUF624
TC A111_contig_2641 A111_contig_2641_246 282226 283338 + 3.A.1.1.22
TF A111_contig_2641 A111_contig_2641_247 283418 284305 + HTH_AraC | HTH_AraC
TC A111_contig_2641 A111_contig_2641_248 284653 285939 + 3.A.1.1.44
TC A111_contig_2641 A111_contig_2641_249 285955 286851 + 3.A.1.1.11
TC A111_contig_2641 A111_contig_2641_250 286867 287706 + 3.A.1.1.36
CAZyme A111_contig_2641 A111_contig_2641_251 287891 290077 + GH36
Gene ID: A111_contig_2641_243
Type: CAZyme
Location: 278371 - 280215 (-)
Gene ID: A111_contig_2641_244
Type: STP
Location: 280212 - 281180 (-)
Gene ID: A111_contig_2641_245
Type: pfam
Location: 281225 - 281920 (-)
Gene ID: A111_contig_2641_246
Type: TC
Location: 282226 - 283338 (+)
Gene ID: A111_contig_2641_247
Type: TF
Location: 283418 - 284305 (+)
Gene ID: A111_contig_2641_248
Type: TC
Location: 284653 - 285939 (+)
Gene ID: A111_contig_2641_249
Type: TC
Location: 285955 - 286851 (+)
Gene ID: A111_contig_2641_250
Type: TC
Location: 286867 - 287706 (+)
Gene ID: A111_contig_2641_251
Type: CAZyme
Location: 287891 - 290077 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A111_contig_2641_250 vegetarian > vegan 1.64601 0.00863

🧭 Explore Read Mapping of CGC

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