Cluster: A111.bin_51_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: A111.bin_51
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1360 | A111_contig_1360_55 | 50359 | 52476 | + | GH13_9 |
| pfam | A111_contig_1360 | A111_contig_1360_56 | 52551 | 53759 | + | NTP_transferase | Hexapep_GlmU |
| pfam | A111_contig_1360 | A111_contig_1360_57 | 53756 | 54874 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | A111_contig_1360 | A111_contig_1360_58 | 54964 | 56400 | + | GT5 |
| CAZyme | A111_contig_1360 | A111_contig_1360_59 | 56693 | 59128 | + | GT35 |
| TC | A111_contig_1360 | A111_contig_1360_60 | 59212 | 60351 | - | 9.B.34.1.2 |
Gene ID: A111_contig_1360_55
Type: CAZyme
Location: 50359 - 52476 (+)
Type: CAZyme
Location: 50359 - 52476 (+)
Gene ID: A111_contig_1360_56
Type: pfam
Location: 52551 - 53759 (+)
Type: pfam
Location: 52551 - 53759 (+)
Gene ID: A111_contig_1360_57
Type: pfam
Location: 53756 - 54874 (+)
Type: pfam
Location: 53756 - 54874 (+)
Gene ID: A111_contig_1360_58
Type: CAZyme
Location: 54964 - 56400 (+)
Type: CAZyme
Location: 54964 - 56400 (+)
Gene ID: A111_contig_1360_59
Type: CAZyme
Location: 56693 - 59128 (+)
Type: CAZyme
Location: 56693 - 59128 (+)
Gene ID: A111_contig_1360_60
Type: TC
Location: 59212 - 60351 (-)
Type: TC
Location: 59212 - 60351 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp019424865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.