Cluster: A111.bin_17_CGC9
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_17
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1209 | A111_contig_1209_818 | 929373 | 931523 | + | GT2 |
| pfam | A111_contig_1209 | A111_contig_1209_819 | 931567 | 932496 | + | Methyltransf_21 |
| pfam | A111_contig_1209 | A111_contig_1209_820 | 932648 | 933499 | + | DUF6270 |
| TC | A111_contig_1209 | A111_contig_1209_821 | 933806 | 937099 | + | 1.B.12.5.1 |
| pfam | A111_contig_1209 | A111_contig_1209_822 | 937518 | 938339 | - | MethyltransfD12 |
| STP | A111_contig_1209 | A111_contig_1209_823 | 938572 | 939339 | + | Fer4 |
| TC | A111_contig_1209 | A111_contig_1209_824 | 939655 | 940839 | - | 2.A.1.60.1 |
| NULL(UNKNOWN) | A111_contig_1209 | A111_contig_1209_825 | 940836 | 941348 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A111_contig_1209 | A111_contig_1209_826 | 941528 | 941866 | - | P-II |
| TC | A111_contig_1209 | A111_contig_1209_827 | 941981 | 943183 | - | 1.A.11.5.1 |
| NULL(UNKNOWN) | A111_contig_1209 | A111_contig_1209_828 | 943497 | 944444 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A111_contig_1209 | A111_contig_1209_829 | 944927 | 947263 | - | 1.B.52.2.1 |
Gene ID: A111_contig_1209_818
Type: CAZyme
Location: 929373 - 931523 (+)
Type: CAZyme
Location: 929373 - 931523 (+)
Gene ID: A111_contig_1209_819
Type: pfam
Location: 931567 - 932496 (+)
Type: pfam
Location: 931567 - 932496 (+)
Gene ID: A111_contig_1209_820
Type: pfam
Location: 932648 - 933499 (+)
Type: pfam
Location: 932648 - 933499 (+)
Gene ID: A111_contig_1209_821
Type: TC
Location: 933806 - 937099 (+)
Type: TC
Location: 933806 - 937099 (+)
Gene ID: A111_contig_1209_822
Type: pfam
Location: 937518 - 938339 (-)
Type: pfam
Location: 937518 - 938339 (-)
Gene ID: A111_contig_1209_823
Type: STP
Location: 938572 - 939339 (+)
Type: STP
Location: 938572 - 939339 (+)
Gene ID: A111_contig_1209_824
Type: TC
Location: 939655 - 940839 (-)
Type: TC
Location: 939655 - 940839 (-)
Gene ID: A111_contig_1209_825
Type:
Location: 940836 - 941348 (-)
Type:
Location: 940836 - 941348 (-)
Gene ID: A111_contig_1209_826
Type: pfam
Location: 941528 - 941866 (-)
Type: pfam
Location: 941528 - 941866 (-)
Gene ID: A111_contig_1209_827
Type: TC
Location: 941981 - 943183 (-)
Type: TC
Location: 941981 - 943183 (-)
Gene ID: A111_contig_1209_828
Type:
Location: 943497 - 944444 (+)
Type:
Location: 943497 - 944444 (+)
Gene ID: A111_contig_1209_829
Type: TC
Location: 944927 - 947263 (-)
Type: TC
Location: 944927 - 947263 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.