Cluster: A111.bin_17_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_17
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1209 | A111_contig_1209_564 | 638858 | 639928 | - | GT28 |
| TC | A111_contig_1209 | A111_contig_1209_565 | 639932 | 641107 | - | 2.A.103.1.3 |
| pfam | A111_contig_1209 | A111_contig_1209_566 | 641425 | 642756 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | A111_contig_1209 | A111_contig_1209_567 | 642932 | 644008 | - | 9.B.146.1.6 |
Gene ID: A111_contig_1209_564
Type: CAZyme
Location: 638858 - 639928 (-)
Type: CAZyme
Location: 638858 - 639928 (-)
Gene ID: A111_contig_1209_565
Type: TC
Location: 639932 - 641107 (-)
Type: TC
Location: 639932 - 641107 (-)
Gene ID: A111_contig_1209_566
Type: pfam
Location: 641425 - 642756 (-)
Type: pfam
Location: 641425 - 642756 (-)
Gene ID: A111_contig_1209_567
Type: TC
Location: 642932 - 644008 (-)
Type: TC
Location: 642932 - 644008 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.