Cluster: A111.bin_17_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_17
- CGC Family ID: CGCFAM_01261
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_1208 | A111_contig_1208_172 | 202226 | 203836 | + | 1.B.61.1.4 |
| TC | A111_contig_1208 | A111_contig_1208_173 | 203957 | 205180 | - | 9.A.41.1.3 |
| CAZyme | A111_contig_1208 | A111_contig_1208_174 | 205191 | 207290 | - | GT107 | GT107 |
| TC | A111_contig_1208 | A111_contig_1208_175 | 207287 | 209161 | - | 1.B.18.1.2 |
| TC | A111_contig_1208 | A111_contig_1208_176 | 209161 | 210360 | - | 8.A.4.2.1 |
| NULL(UNKNOWN) | A111_contig_1208 | A111_contig_1208_177 | 210364 | 210879 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A111_contig_1208 | A111_contig_1208_178 | 210827 | 211504 | - | 3.A.1.101.1 |
Gene ID: A111_contig_1208_172
Type: TC
Location: 202226 - 203836 (+)
Type: TC
Location: 202226 - 203836 (+)
Gene ID: A111_contig_1208_173
Type: TC
Location: 203957 - 205180 (-)
Type: TC
Location: 203957 - 205180 (-)
Gene ID: A111_contig_1208_174
Type: CAZyme
Location: 205191 - 207290 (-)
Type: CAZyme
Location: 205191 - 207290 (-)
Gene ID: A111_contig_1208_175
Type: TC
Location: 207287 - 209161 (-)
Type: TC
Location: 207287 - 209161 (-)
Gene ID: A111_contig_1208_176
Type: TC
Location: 209161 - 210360 (-)
Type: TC
Location: 209161 - 210360 (-)
Gene ID: A111_contig_1208_177
Type:
Location: 210364 - 210879 (+)
Type:
Location: 210364 - 210879 (+)
Gene ID: A111_contig_1208_178
Type: TC
Location: 210827 - 211504 (-)
Type: TC
Location: 210827 - 211504 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.