Cluster: A111.bin_17_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_17
- CGC Family ID: CGCFAM_06529
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_1209 | A111_contig_1209_2266 | 2695451 | 2696827 | + | 2.A.22.5.3 |
| TC | A111_contig_1209 | A111_contig_1209_2267 | 2696856 | 2698238 | + | 2.A.22.5.3 |
| peptidase | A111_contig_1209 | A111_contig_1209_2268 | 2698430 | 2699074 | + | S26.025 |
| NULL(UNKNOWN) | A111_contig_1209 | A111_contig_1209_2269 | 2699447 | 2699935 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A111_contig_1209 | A111_contig_1209_2270 | 2700160 | 2702253 | - | 1.B.52.2.1 |
| NULL(UNKNOWN) | A111_contig_1209 | A111_contig_1209_2271 | 2702472 | 2703065 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A111_contig_1209 | A111_contig_1209_2272 | 2703329 | 2704414 | + | GT1 |
Gene ID: A111_contig_1209_2266
Type: TC
Location: 2695451 - 2696827 (+)
Type: TC
Location: 2695451 - 2696827 (+)
Gene ID: A111_contig_1209_2267
Type: TC
Location: 2696856 - 2698238 (+)
Type: TC
Location: 2696856 - 2698238 (+)
Gene ID: A111_contig_1209_2268
Type: peptidase
Location: 2698430 - 2699074 (+)
Type: peptidase
Location: 2698430 - 2699074 (+)
Gene ID: A111_contig_1209_2269
Type:
Location: 2699447 - 2699935 (-)
Type:
Location: 2699447 - 2699935 (-)
Gene ID: A111_contig_1209_2270
Type: TC
Location: 2700160 - 2702253 (-)
Type: TC
Location: 2700160 - 2702253 (-)
Gene ID: A111_contig_1209_2271
Type:
Location: 2702472 - 2703065 (-)
Type:
Location: 2702472 - 2703065 (-)
Gene ID: A111_contig_1209_2272
Type: CAZyme
Location: 2703329 - 2704414 (+)
Type: CAZyme
Location: 2703329 - 2704414 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.