Cluster: A111.bin_17_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: A111.bin_17
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_1209 | A111_contig_1209_906 | 1052075 | 1053190 | - | 2.A.119.1.3 |
| TF | A111_contig_1209 | A111_contig_1209_907 | 1053296 | 1054447 | - | HTH_5 |
| TC | A111_contig_1209 | A111_contig_1209_908 | 1055061 | 1056662 | - | 2.A.36.6.11 |
| pfam | A111_contig_1209 | A111_contig_1209_909 | 1057240 | 1058730 | + | NYN |
| pfam | A111_contig_1209 | A111_contig_1209_910 | 1059051 | 1060028 | + | Acyl_transf_3 |
| TC | A111_contig_1209 | A111_contig_1209_911 | 1060172 | 1061392 | - | 2.A.1.59.4 |
| pfam | A111_contig_1209 | A111_contig_1209_912 | 1061943 | 1062581 | - | OmpH |
| NULL(UNKNOWN) | A111_contig_1209 | A111_contig_1209_913 | 1062940 | 1063458 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A111_contig_1209 | A111_contig_1209_914 | 1063588 | 1064694 | - | GH23 |
| NULL(UNKNOWN) | A111_contig_1209 | A111_contig_1209_915 | 1064967 | 1066103 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A111_contig_1209 | A111_contig_1209_916 | 1066172 | 1067935 | + | 2.A.53.3.4 |
Gene ID: A111_contig_1209_906
Type: TC
Location: 1052075 - 1053190 (-)
Type: TC
Location: 1052075 - 1053190 (-)
Gene ID: A111_contig_1209_907
Type: TF
Location: 1053296 - 1054447 (-)
Type: TF
Location: 1053296 - 1054447 (-)
Gene ID: A111_contig_1209_908
Type: TC
Location: 1055061 - 1056662 (-)
Type: TC
Location: 1055061 - 1056662 (-)
Gene ID: A111_contig_1209_909
Type: pfam
Location: 1057240 - 1058730 (+)
Type: pfam
Location: 1057240 - 1058730 (+)
Gene ID: A111_contig_1209_910
Type: pfam
Location: 1059051 - 1060028 (+)
Type: pfam
Location: 1059051 - 1060028 (+)
Gene ID: A111_contig_1209_911
Type: TC
Location: 1060172 - 1061392 (-)
Type: TC
Location: 1060172 - 1061392 (-)
Gene ID: A111_contig_1209_912
Type: pfam
Location: 1061943 - 1062581 (-)
Type: pfam
Location: 1061943 - 1062581 (-)
Gene ID: A111_contig_1209_913
Type:
Location: 1062940 - 1063458 (+)
Type:
Location: 1062940 - 1063458 (+)
Gene ID: A111_contig_1209_914
Type: CAZyme
Location: 1063588 - 1064694 (-)
Type: CAZyme
Location: 1063588 - 1064694 (-)
Gene ID: A111_contig_1209_915
Type:
Location: 1064967 - 1066103 (+)
Type:
Location: 1064967 - 1066103 (+)
Gene ID: A111_contig_1209_916
Type: TC
Location: 1066172 - 1067935 (+)
Type: TC
Location: 1066172 - 1067935 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.