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Cluster: A111.bin_12_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A111_scaffold_628 A111_scaffold_628_1047 1159880 1161832 + 3.A.2.2.2
TC A111_scaffold_628 A111_scaffold_628_1048 1161848 1162372 + 3.A.2.2.2
pfam A111_scaffold_628 A111_scaffold_628_1049 1162392 1163081 + vATP-synt_E
pfam A111_scaffold_628 A111_scaffold_628_1050 1163099 1164097 + vATP-synt_AC39
TC A111_scaffold_628 A111_scaffold_628_1051 1164113 1164421 + 3.A.2.2.2
TC A111_scaffold_628 A111_scaffold_628_1052 1164668 1166440 + 3.A.2.2.2
TC A111_scaffold_628 A111_scaffold_628_1053 1166437 1167813 + 3.A.2.2.2
TC A111_scaffold_628 A111_scaffold_628_1054 1167826 1168515 + 3.A.2.2.2
pfam A111_scaffold_628 A111_scaffold_628_1055 1168628 1169347 - Glucosamine_iso
CAZyme A111_scaffold_628 A111_scaffold_628_1056 1169363 1170478 - CE9
Gene ID: A111_scaffold_628_1047
Type: TC
Location: 1159880 - 1161832 (+)
Gene ID: A111_scaffold_628_1048
Type: TC
Location: 1161848 - 1162372 (+)
Gene ID: A111_scaffold_628_1049
Type: pfam
Location: 1162392 - 1163081 (+)
Gene ID: A111_scaffold_628_1050
Type: pfam
Location: 1163099 - 1164097 (+)
Gene ID: A111_scaffold_628_1051
Type: TC
Location: 1164113 - 1164421 (+)
Gene ID: A111_scaffold_628_1052
Type: TC
Location: 1164668 - 1166440 (+)
Gene ID: A111_scaffold_628_1053
Type: TC
Location: 1166437 - 1167813 (+)
Gene ID: A111_scaffold_628_1054
Type: TC
Location: 1167826 - 1168515 (+)
Gene ID: A111_scaffold_628_1055
Type: pfam
Location: 1168628 - 1169347 (-)
Gene ID: A111_scaffold_628_1056
Type: CAZyme
Location: 1169363 - 1170478 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A111_scaffold_628_1053 vegetarian > vegan 1.03902 0.01287

🧭 Explore Read Mapping of CGC

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