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Cluster: A111.bin_12_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A111_contig_1219 A111_contig_1219_94 112140 113231 - GT4
TC A111_contig_1219 A111_contig_1219_95 113398 113955 + 9.B.105.2.1
pfam A111_contig_1219 A111_contig_1219_96 114009 116807 - SLH | SLH | SLH | Big_2 | SH3_3 | NAGPA | aBig_2
TC A111_contig_1219 A111_contig_1219_97 117074 118639 + 2.A.66.4.1
TC A111_contig_1219 A111_contig_1219_98 118647 120095 + 9.B.67.1.1
CAZyme A111_contig_1219 A111_contig_1219_99 120092 121231 + GT4
pfam A111_contig_1219 A111_contig_1219_100 121212 121715 + DUF4330
pfam A111_contig_1219 A111_contig_1219_101 121712 122224 + DUF4330
CAZyme A111_contig_1219 A111_contig_1219_102 122247 124460 + GT4
TC A111_contig_1219 A111_contig_1219_103 124597 125565 + 3.A.1.15.4
TC A111_contig_1219 A111_contig_1219_104 125562 126365 + 3.A.1.15.5
TC A111_contig_1219 A111_contig_1219_105 126365 127210 + 3.A.1.15.13
NULL(UNKNOWN) A111_contig_1219 A111_contig_1219_106 127256 127672 - NULL(UNKNOWN)
[View Structural Homologs]
TC A111_contig_1219 A111_contig_1219_107 133679 135001 + 2.A.22.5.2
TF A111_contig_1219 A111_contig_1219_108 135142 135405 - SpoVT_AbrB
TC A111_contig_1219 A111_contig_1219_109 135663 136241 + 9.B.156.3.1
TC A111_contig_1219 A111_contig_1219_110 136244 136765 + 9.B.156.3.1
TC A111_contig_1219 A111_contig_1219_111 136793 138118 - 3.A.1.121.4
pfam A111_contig_1219 A111_contig_1219_112 138128 139276 - tRNA-synt_2c | tRNA_SAD
TC A111_contig_1219 A111_contig_1219_113 139479 141416 + 4.A.2.1.7
STP A111_contig_1219 A111_contig_1219_114 141433 141687 + PTS-HPr
pfam A111_contig_1219 A111_contig_1219_115 141903 142166 - Trns_repr_metal
TC A111_contig_1219 A111_contig_1219_116 142163 144733 - 3.A.3.5.15
Gene ID: A111_contig_1219_94
Type: CAZyme
Location: 112140 - 113231 (-)
Gene ID: A111_contig_1219_95
Type: TC
Location: 113398 - 113955 (+)
Gene ID: A111_contig_1219_96
Type: pfam
Location: 114009 - 116807 (-)
Gene ID: A111_contig_1219_97
Type: TC
Location: 117074 - 118639 (+)
Gene ID: A111_contig_1219_98
Type: TC
Location: 118647 - 120095 (+)
Gene ID: A111_contig_1219_99
Type: CAZyme
Location: 120092 - 121231 (+)
Gene ID: A111_contig_1219_100
Type: pfam
Location: 121212 - 121715 (+)
Gene ID: A111_contig_1219_101
Type: pfam
Location: 121712 - 122224 (+)
Gene ID: A111_contig_1219_102
Type: CAZyme
Location: 122247 - 124460 (+)
Gene ID: A111_contig_1219_103
Type: TC
Location: 124597 - 125565 (+)
Gene ID: A111_contig_1219_104
Type: TC
Location: 125562 - 126365 (+)
Gene ID: A111_contig_1219_105
Type: TC
Location: 126365 - 127210 (+)
Gene ID: A111_contig_1219_106
Type:
Location: 127256 - 127672 (-)
Gene ID: A111_contig_1219_107
Type: TC
Location: 133679 - 135001 (+)
Gene ID: A111_contig_1219_108
Type: TF
Location: 135142 - 135405 (-)
Gene ID: A111_contig_1219_109
Type: TC
Location: 135663 - 136241 (+)
Gene ID: A111_contig_1219_110
Type: TC
Location: 136244 - 136765 (+)
Gene ID: A111_contig_1219_111
Type: TC
Location: 136793 - 138118 (-)
Gene ID: A111_contig_1219_112
Type: pfam
Location: 138128 - 139276 (-)
Gene ID: A111_contig_1219_113
Type: TC
Location: 139479 - 141416 (+)
Gene ID: A111_contig_1219_114
Type: STP
Location: 141433 - 141687 (+)
Gene ID: A111_contig_1219_115
Type: pfam
Location: 141903 - 142166 (-)
Gene ID: A111_contig_1219_116
Type: TC
Location: 142163 - 144733 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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