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Cluster: A11.bin_2_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A11_contig_346 A11_contig_346_33 27945 28379 + 3.A.7.19.1
pfam A11_contig_346 A11_contig_346_34 28449 28712 + Ribosomal_S18
NULL(UNKNOWN) A11_contig_346 A11_contig_346_35 28826 29167 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A11_contig_346 A11_contig_346_36 29328 34898 + GH2
CAZyme A11_contig_346 A11_contig_346_37 35077 36837 + GH20
CAZyme A11_contig_346 A11_contig_346_38 36981 41753 + CBM32 | GH20
CAZyme A11_contig_346 A11_contig_346_39 41768 45061 + GH51_9
pfam A11_contig_346 A11_contig_346_40 45398 46819 - PLDc_2 | PLDc_2
NULL(UNKNOWN) A11_contig_346 A11_contig_346_41 47017 47763 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A11_contig_346 A11_contig_346_42 47788 51516 + GH136
Gene ID: A11_contig_346_33
Type: TC
Location: 27945 - 28379 (+)
Gene ID: A11_contig_346_34
Type: pfam
Location: 28449 - 28712 (+)
Gene ID: A11_contig_346_35
Type:
Location: 28826 - 29167 (+)
Gene ID: A11_contig_346_36
Type: CAZyme
Location: 29328 - 34898 (+)
Gene ID: A11_contig_346_37
Type: CAZyme
Location: 35077 - 36837 (+)
Gene ID: A11_contig_346_38
Type: CAZyme
Location: 36981 - 41753 (+)
Gene ID: A11_contig_346_39
Type: CAZyme
Location: 41768 - 45061 (+)
Gene ID: A11_contig_346_40
Type: pfam
Location: 45398 - 46819 (-)
Gene ID: A11_contig_346_41
Type:
Location: 47017 - 47763 (+)
Gene ID: A11_contig_346_42
Type: CAZyme
Location: 47788 - 51516 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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