Cluster: A104.bin_21_CGC3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: A104.bin_21
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A104_contig_7660 | A104_contig_7660_84 | 99891 | 102317 | + | 3.A.3.23.2 |
| TC | A104_contig_7660 | A104_contig_7660_85 | 102462 | 102692 | - | 3.D.1.6.4 |
| STP | A104_contig_7660 | A104_contig_7660_86 | 102767 | 104146 | - | PALP |
| CAZyme | A104_contig_7660 | A104_contig_7660_87 | 104489 | 106306 | - | GH13_39 |
| CAZyme | A104_contig_7660 | A104_contig_7660_88 | 106330 | 108753 | - | GT35 |
| CAZyme | A104_contig_7660 | A104_contig_7660_89 | 108815 | 110323 | - | GT5 |
| pfam | A104_contig_7660 | A104_contig_7660_90 | 110340 | 111452 | - | NTP_transferase | Hexapep_GlmU |
| pfam | A104_contig_7660 | A104_contig_7660_91 | 111454 | 112656 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | A104_contig_7660 | A104_contig_7660_92 | 112674 | 114581 | - | CBM48 | GH13_9 |
Gene ID: A104_contig_7660_84
Type: TC
Location: 99891 - 102317 (+)
Type: TC
Location: 99891 - 102317 (+)
Gene ID: A104_contig_7660_85
Type: TC
Location: 102462 - 102692 (-)
Type: TC
Location: 102462 - 102692 (-)
Gene ID: A104_contig_7660_86
Type: STP
Location: 102767 - 104146 (-)
Type: STP
Location: 102767 - 104146 (-)
Gene ID: A104_contig_7660_87
Type: CAZyme
Location: 104489 - 106306 (-)
Type: CAZyme
Location: 104489 - 106306 (-)
Gene ID: A104_contig_7660_88
Type: CAZyme
Location: 106330 - 108753 (-)
Type: CAZyme
Location: 106330 - 108753 (-)
Gene ID: A104_contig_7660_89
Type: CAZyme
Location: 108815 - 110323 (-)
Type: CAZyme
Location: 108815 - 110323 (-)
Gene ID: A104_contig_7660_90
Type: pfam
Location: 110340 - 111452 (-)
Type: pfam
Location: 110340 - 111452 (-)
Gene ID: A104_contig_7660_91
Type: pfam
Location: 111454 - 112656 (-)
Type: pfam
Location: 111454 - 112656 (-)
Gene ID: A104_contig_7660_92
Type: CAZyme
Location: 112674 - 114581 (-)
Type: CAZyme
Location: 112674 - 114581 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA1259
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.