Cluster: A104.bin_19_CGC7
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: A104.bin_19
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A104_contig_525 | A104_contig_525_372 | 449375 | 450049 | - | 3.A.1.122.2 |
| TF | A104_contig_525 | A104_contig_525_373 | 450095 | 450721 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | A104_contig_525 | A104_contig_525_374 | 450788 | 451186 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A104_contig_525 | A104_contig_525_375 | 451436 | 452467 | + | GT2 |
| CAZyme | A104_contig_525 | A104_contig_525_376 | 452473 | 453552 | + | GT4 |
| CAZyme | A104_contig_525 | A104_contig_525_377 | 453573 | 454658 | + | GT113 |
| pfam | A104_contig_525 | A104_contig_525_378 | 454673 | 456118 | + | Wzy_C |
| TC | A104_contig_525 | A104_contig_525_379 | 456115 | 457578 | + | 2.A.66.2.16 |
| CAZyme | A104_contig_525 | A104_contig_525_380 | 457633 | 458934 | - | GH180 |
| CAZyme | A104_contig_525 | A104_contig_525_381 | 458947 | 459912 | - | CE2 |
| pfam | A104_contig_525 | A104_contig_525_382 | 459955 | 461361 | - | FAD_binding_2 | Amino_oxidase | NAD_binding_8 |
| CAZyme | A104_contig_525 | A104_contig_525_383 | 461363 | 462811 | - | GH77 |
| TC | A104_contig_525 | A104_contig_525_384 | 462822 | 463670 | - | 3.A.1.1.45 |
| TC | A104_contig_525 | A104_contig_525_385 | 463667 | 464548 | - | 3.A.1.1.45 |
| TC | A104_contig_525 | A104_contig_525_386 | 464567 | 465868 | - | 3.A.1.1.45 |
Gene ID: A104_contig_525_372
Type: TC
Location: 449375 - 450049 (-)
Type: TC
Location: 449375 - 450049 (-)
Gene ID: A104_contig_525_373
Type: TF
Location: 450095 - 450721 (-)
Type: TF
Location: 450095 - 450721 (-)
Gene ID: A104_contig_525_374
Type:
Location: 450788 - 451186 (+)
Type:
Location: 450788 - 451186 (+)
Gene ID: A104_contig_525_375
Type: CAZyme
Location: 451436 - 452467 (+)
Type: CAZyme
Location: 451436 - 452467 (+)
Gene ID: A104_contig_525_376
Type: CAZyme
Location: 452473 - 453552 (+)
Type: CAZyme
Location: 452473 - 453552 (+)
Gene ID: A104_contig_525_377
Type: CAZyme
Location: 453573 - 454658 (+)
Type: CAZyme
Location: 453573 - 454658 (+)
Gene ID: A104_contig_525_378
Type: pfam
Location: 454673 - 456118 (+)
Type: pfam
Location: 454673 - 456118 (+)
Gene ID: A104_contig_525_379
Type: TC
Location: 456115 - 457578 (+)
Type: TC
Location: 456115 - 457578 (+)
Gene ID: A104_contig_525_380
Type: CAZyme
Location: 457633 - 458934 (-)
Type: CAZyme
Location: 457633 - 458934 (-)
Gene ID: A104_contig_525_381
Type: CAZyme
Location: 458947 - 459912 (-)
Type: CAZyme
Location: 458947 - 459912 (-)
Gene ID: A104_contig_525_382
Type: pfam
Location: 459955 - 461361 (-)
Type: pfam
Location: 459955 - 461361 (-)
Gene ID: A104_contig_525_383
Type: CAZyme
Location: 461363 - 462811 (-)
Type: CAZyme
Location: 461363 - 462811 (-)
Gene ID: A104_contig_525_384
Type: TC
Location: 462822 - 463670 (-)
Type: TC
Location: 462822 - 463670 (-)
Gene ID: A104_contig_525_385
Type: TC
Location: 463667 - 464548 (-)
Type: TC
Location: 463667 - 464548 (-)
Gene ID: A104_contig_525_386
Type: TC
Location: 464567 - 465868 (-)
Type: TC
Location: 464567 - 465868 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp004558485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.