Cluster: A104.bin_19_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: A104.bin_19
- CGC Family ID: CGCFAM_02970
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A104_contig_525 | A104_contig_525_323 | 377290 | 378237 | + | 3.A.1.34.1 |
| TC | A104_contig_525 | A104_contig_525_324 | 378234 | 379007 | + | 3.A.1.34.1 |
| CAZyme | A104_contig_525 | A104_contig_525_325 | 379191 | 381482 | + | GH31_3 |
| CAZyme | A104_contig_525 | A104_contig_525_326 | 381549 | 383801 | + | GH31_3 |
| TC | A104_contig_525 | A104_contig_525_327 | 383946 | 384890 | - | 3.A.1.1.11 |
| TC | A104_contig_525 | A104_contig_525_328 | 384887 | 385810 | - | 3.A.1.1.34 |
| pfam | A104_contig_525 | A104_contig_525_329 | 385814 | 388102 | - | DUF5696 |
| pfam | A104_contig_525 | A104_contig_525_330 | 388086 | 390158 | - | NHL | Yip1 | SGL |
| TC | A104_contig_525 | A104_contig_525_331 | 390174 | 391073 | - | 3.A.1.1.29 |
| TC | A104_contig_525 | A104_contig_525_332 | 391087 | 391986 | - | 3.A.1.1.34 |
| STP | A104_contig_525 | A104_contig_525_333 | 391986 | 394928 | - | SBP_bac_1 |
| CAZyme | A104_contig_525 | A104_contig_525_334 | 395263 | 398679 | - | GH31 |
Gene ID: A104_contig_525_323
Type: TC
Location: 377290 - 378237 (+)
Type: TC
Location: 377290 - 378237 (+)
Gene ID: A104_contig_525_324
Type: TC
Location: 378234 - 379007 (+)
Type: TC
Location: 378234 - 379007 (+)
Gene ID: A104_contig_525_325
Type: CAZyme
Location: 379191 - 381482 (+)
Type: CAZyme
Location: 379191 - 381482 (+)
Gene ID: A104_contig_525_326
Type: CAZyme
Location: 381549 - 383801 (+)
Type: CAZyme
Location: 381549 - 383801 (+)
Gene ID: A104_contig_525_327
Type: TC
Location: 383946 - 384890 (-)
Type: TC
Location: 383946 - 384890 (-)
Gene ID: A104_contig_525_328
Type: TC
Location: 384887 - 385810 (-)
Type: TC
Location: 384887 - 385810 (-)
Gene ID: A104_contig_525_329
Type: pfam
Location: 385814 - 388102 (-)
Type: pfam
Location: 385814 - 388102 (-)
Gene ID: A104_contig_525_330
Type: pfam
Location: 388086 - 390158 (-)
Type: pfam
Location: 388086 - 390158 (-)
Gene ID: A104_contig_525_331
Type: TC
Location: 390174 - 391073 (-)
Type: TC
Location: 390174 - 391073 (-)
Gene ID: A104_contig_525_332
Type: TC
Location: 391087 - 391986 (-)
Type: TC
Location: 391087 - 391986 (-)
Gene ID: A104_contig_525_333
Type: STP
Location: 391986 - 394928 (-)
Type: STP
Location: 391986 - 394928 (-)
Gene ID: A104_contig_525_334
Type: CAZyme
Location: 395263 - 398679 (-)
Type: CAZyme
Location: 395263 - 398679 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp004558485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.