Cluster: A104.bin_19_CGC3
🧬 Cluster Details
- Gene Count: 26
- CAZyme Count: 11
- Substrate:
- Genome ID: A104.bin_19
- CGC Family ID: CGCFAM_06514
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A104_contig_525 | A104_contig_525_103 | 111943 | 112878 | - | GH43_31 |
| pfam | A104_contig_525 | A104_contig_525_104 | 112912 | 113568 | - | Lipase_GDSL | Lipase_GDSL_2 |
| NULL(UNKNOWN) | A104_contig_525 | A104_contig_525_105 | 113656 | 114942 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A104_contig_525 | A104_contig_525_106 | 115136 | 118090 | - | CE4 |
| CAZyme | A104_contig_525 | A104_contig_525_107 | 118118 | 118984 | - | CE4 |
| pfam | A104_contig_525 | A104_contig_525_108 | 119009 | 119926 | - | SASA |
| CAZyme | A104_contig_525 | A104_contig_525_109 | 119951 | 127336 | - | GH13_21 |
| CAZyme | A104_contig_525 | A104_contig_525_110 | 127375 | 129891 | - | GH38 |
| pfam | A104_contig_525 | A104_contig_525_111 | 129893 | 130726 | - | AP_endonuc_2 |
| CAZyme | A104_contig_525 | A104_contig_525_112 | 130844 | 131863 | - | GH43_26 |
| pfam | A104_contig_525 | A104_contig_525_113 | 131928 | 137216 | - | Lactamase_B |
| NULL(UNKNOWN) | A104_contig_525 | A104_contig_525_114 | 137243 | 137629 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A104_contig_525 | A104_contig_525_115 | 137643 | 142343 | - | GH13_21 |
| NULL(UNKNOWN) | A104_contig_525 | A104_contig_525_116 | 142340 | 144976 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | A104_contig_525 | A104_contig_525_117 | 145007 | 146440 | - | SBP_bac_1 |
| TC | A104_contig_525 | A104_contig_525_118 | 146550 | 147452 | - | 3.A.1.1.32 |
| TC | A104_contig_525 | A104_contig_525_119 | 147433 | 148371 | - | 3.A.1.1.20 |
| pfam | A104_contig_525 | A104_contig_525_120 | 148368 | 150899 | - | DUF5696 |
| pfam | A104_contig_525 | A104_contig_525_121 | 150960 | 153047 | - | Yip1 |
| TC | A104_contig_525 | A104_contig_525_122 | 153054 | 153860 | - | 3.A.1.1.39 |
| TC | A104_contig_525 | A104_contig_525_123 | 153902 | 154804 | - | 3.A.1.1.23 |
| STP | A104_contig_525 | A104_contig_525_124 | 154811 | 157663 | - | SBP_bac_1 |
| CAZyme | A104_contig_525 | A104_contig_525_125 | 157775 | 159922 | - | GH78 |
| CAZyme | A104_contig_525 | A104_contig_525_126 | 159934 | 161364 | - | GH20 |
| CAZyme | A104_contig_525 | A104_contig_525_127 | 161367 | 165344 | - | GH13_21 |
| CAZyme | A104_contig_525 | A104_contig_525_128 | 165556 | 166944 | + | GH28 |
Gene ID: A104_contig_525_103
Type: CAZyme
Location: 111943 - 112878 (-)
Type: CAZyme
Location: 111943 - 112878 (-)
Gene ID: A104_contig_525_104
Type: pfam
Location: 112912 - 113568 (-)
Type: pfam
Location: 112912 - 113568 (-)
Gene ID: A104_contig_525_105
Type:
Location: 113656 - 114942 (-)
Type:
Location: 113656 - 114942 (-)
Gene ID: A104_contig_525_106
Type: CAZyme
Location: 115136 - 118090 (-)
Type: CAZyme
Location: 115136 - 118090 (-)
Gene ID: A104_contig_525_107
Type: CAZyme
Location: 118118 - 118984 (-)
Type: CAZyme
Location: 118118 - 118984 (-)
Gene ID: A104_contig_525_108
Type: pfam
Location: 119009 - 119926 (-)
Type: pfam
Location: 119009 - 119926 (-)
Gene ID: A104_contig_525_109
Type: CAZyme
Location: 119951 - 127336 (-)
Type: CAZyme
Location: 119951 - 127336 (-)
Gene ID: A104_contig_525_110
Type: CAZyme
Location: 127375 - 129891 (-)
Type: CAZyme
Location: 127375 - 129891 (-)
Gene ID: A104_contig_525_111
Type: pfam
Location: 129893 - 130726 (-)
Type: pfam
Location: 129893 - 130726 (-)
Gene ID: A104_contig_525_112
Type: CAZyme
Location: 130844 - 131863 (-)
Type: CAZyme
Location: 130844 - 131863 (-)
Gene ID: A104_contig_525_113
Type: pfam
Location: 131928 - 137216 (-)
Type: pfam
Location: 131928 - 137216 (-)
Gene ID: A104_contig_525_114
Type:
Location: 137243 - 137629 (-)
Type:
Location: 137243 - 137629 (-)
Gene ID: A104_contig_525_115
Type: CAZyme
Location: 137643 - 142343 (-)
Type: CAZyme
Location: 137643 - 142343 (-)
Gene ID: A104_contig_525_116
Type:
Location: 142340 - 144976 (-)
Type:
Location: 142340 - 144976 (-)
Gene ID: A104_contig_525_117
Type: STP
Location: 145007 - 146440 (-)
Type: STP
Location: 145007 - 146440 (-)
Gene ID: A104_contig_525_118
Type: TC
Location: 146550 - 147452 (-)
Type: TC
Location: 146550 - 147452 (-)
Gene ID: A104_contig_525_119
Type: TC
Location: 147433 - 148371 (-)
Type: TC
Location: 147433 - 148371 (-)
Gene ID: A104_contig_525_120
Type: pfam
Location: 148368 - 150899 (-)
Type: pfam
Location: 148368 - 150899 (-)
Gene ID: A104_contig_525_121
Type: pfam
Location: 150960 - 153047 (-)
Type: pfam
Location: 150960 - 153047 (-)
Gene ID: A104_contig_525_122
Type: TC
Location: 153054 - 153860 (-)
Type: TC
Location: 153054 - 153860 (-)
Gene ID: A104_contig_525_123
Type: TC
Location: 153902 - 154804 (-)
Type: TC
Location: 153902 - 154804 (-)
Gene ID: A104_contig_525_124
Type: STP
Location: 154811 - 157663 (-)
Type: STP
Location: 154811 - 157663 (-)
Gene ID: A104_contig_525_125
Type: CAZyme
Location: 157775 - 159922 (-)
Type: CAZyme
Location: 157775 - 159922 (-)
Gene ID: A104_contig_525_126
Type: CAZyme
Location: 159934 - 161364 (-)
Type: CAZyme
Location: 159934 - 161364 (-)
Gene ID: A104_contig_525_127
Type: CAZyme
Location: 161367 - 165344 (-)
Type: CAZyme
Location: 161367 - 165344 (-)
Gene ID: A104_contig_525_128
Type: CAZyme
Location: 165556 - 166944 (+)
Type: CAZyme
Location: 165556 - 166944 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp004558485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.