Cluster: A104.bin_19_CGC27
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: A104.bin_19
- CGC Family ID: CGCFAM_06512
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A104_contig_2590 | A104_contig_2590_666 | 727005 | 728228 | + | GT4 |
| CAZyme | A104_contig_2590 | A104_contig_2590_667 | 728225 | 729280 | + | GT2 |
| CAZyme | A104_contig_2590 | A104_contig_2590_668 | 729284 | 730276 | + | GT2 |
| CAZyme | A104_contig_2590 | A104_contig_2590_669 | 730292 | 731377 | + | GT2 |
| STP | A104_contig_2590 | A104_contig_2590_670 | 731370 | 732740 | + | EAL |
| TC | A104_contig_2590 | A104_contig_2590_671 | 732789 | 734138 | + | 9.B.34.1.2 |
| TF | A104_contig_2590 | A104_contig_2590_672 | 734175 | 734984 | - | HTH_AraC | HTH_AraC |
| pfam | A104_contig_2590 | A104_contig_2590_673 | 735106 | 735960 | + | AP_endonuc_2 |
| CAZyme | A104_contig_2590 | A104_contig_2590_674 | 735963 | 737033 | + | GH179 |
| pfam | A104_contig_2590 | A104_contig_2590_675 | 737038 | 737874 | + | AP_endonuc_2 |
| TC | A104_contig_2590 | A104_contig_2590_676 | 737917 | 738591 | - | 1.C.113.1.3 |
Gene ID: A104_contig_2590_666
Type: CAZyme
Location: 727005 - 728228 (+)
Type: CAZyme
Location: 727005 - 728228 (+)
Gene ID: A104_contig_2590_667
Type: CAZyme
Location: 728225 - 729280 (+)
Type: CAZyme
Location: 728225 - 729280 (+)
Gene ID: A104_contig_2590_668
Type: CAZyme
Location: 729284 - 730276 (+)
Type: CAZyme
Location: 729284 - 730276 (+)
Gene ID: A104_contig_2590_669
Type: CAZyme
Location: 730292 - 731377 (+)
Type: CAZyme
Location: 730292 - 731377 (+)
Gene ID: A104_contig_2590_670
Type: STP
Location: 731370 - 732740 (+)
Type: STP
Location: 731370 - 732740 (+)
Gene ID: A104_contig_2590_671
Type: TC
Location: 732789 - 734138 (+)
Type: TC
Location: 732789 - 734138 (+)
Gene ID: A104_contig_2590_672
Type: TF
Location: 734175 - 734984 (-)
Type: TF
Location: 734175 - 734984 (-)
Gene ID: A104_contig_2590_673
Type: pfam
Location: 735106 - 735960 (+)
Type: pfam
Location: 735106 - 735960 (+)
Gene ID: A104_contig_2590_674
Type: CAZyme
Location: 735963 - 737033 (+)
Type: CAZyme
Location: 735963 - 737033 (+)
Gene ID: A104_contig_2590_675
Type: pfam
Location: 737038 - 737874 (+)
Type: pfam
Location: 737038 - 737874 (+)
Gene ID: A104_contig_2590_676
Type: TC
Location: 737917 - 738591 (-)
Type: TC
Location: 737917 - 738591 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp004558485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.