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Cluster: A104.bin_19_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A104_contig_2590 A104_contig_2590_475 520535 521452 + 3.A.1.5.2
TC A104_contig_2590 A104_contig_2590_476 521472 522512 + 3.A.1.5.2
TC A104_contig_2590 A104_contig_2590_477 522530 523534 + 3.A.1.5.2
TC A104_contig_2590 A104_contig_2590_478 523527 524525 + 3.A.1.5.37
TC A104_contig_2590 A104_contig_2590_479 524618 526294 + 3.A.1.5.41
peptidase A104_contig_2590 A104_contig_2590_480 526400 527686 + M20.UPB
CAZyme A104_contig_2590 A104_contig_2590_481 527699 529882 + GH36
NULL(UNKNOWN) A104_contig_2590 A104_contig_2590_482 529937 530344 - NULL(UNKNOWN)
[View Structural Homologs]
TC A104_contig_2590 A104_contig_2590_483 530361 531275 - 2.A.66.1.29
Gene ID: A104_contig_2590_475
Type: TC
Location: 520535 - 521452 (+)
Gene ID: A104_contig_2590_476
Type: TC
Location: 521472 - 522512 (+)
Gene ID: A104_contig_2590_477
Type: TC
Location: 522530 - 523534 (+)
Gene ID: A104_contig_2590_478
Type: TC
Location: 523527 - 524525 (+)
Gene ID: A104_contig_2590_479
Type: TC
Location: 524618 - 526294 (+)
Gene ID: A104_contig_2590_480
Type: peptidase
Location: 526400 - 527686 (+)
Gene ID: A104_contig_2590_481
Type: CAZyme
Location: 527699 - 529882 (+)
Gene ID: A104_contig_2590_482
Type:
Location: 529937 - 530344 (-)
Gene ID: A104_contig_2590_483
Type: TC
Location: 530361 - 531275 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A104_contig_2590_476 vegan > omnivore 1.50402 0.00290

🧭 Explore Read Mapping of CGC

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