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Cluster: A104.bin_19_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A104_contig_2590 A104_contig_2590_404 435518 437443 + PL27
TF A104_contig_2590 A104_contig_2590_405 437903 438922 - HTH_AraC | HTH_AraC
TC A104_contig_2590 A104_contig_2590_406 438946 440760 - 8.A.59.2.1
CAZyme A104_contig_2590 A104_contig_2590_407 441115 449541 + CBM67
STP A104_contig_2590 A104_contig_2590_408 449615 451159 + SBP_bac_1
TC A104_contig_2590 A104_contig_2590_409 451180 452118 + 3.A.1.1.36
TC A104_contig_2590 A104_contig_2590_410 452111 452977 + 3.A.1.1.18
CAZyme A104_contig_2590 A104_contig_2590_411 453044 454534 + GH78
CAZyme A104_contig_2590 A104_contig_2590_412 454536 456113 + GH36
CAZyme A104_contig_2590 A104_contig_2590_413 456126 457394 + GH109
Gene ID: A104_contig_2590_404
Type: CAZyme
Location: 435518 - 437443 (+)
Gene ID: A104_contig_2590_405
Type: TF
Location: 437903 - 438922 (-)
Gene ID: A104_contig_2590_406
Type: TC
Location: 438946 - 440760 (-)
Gene ID: A104_contig_2590_407
Type: CAZyme
Location: 441115 - 449541 (+)
Gene ID: A104_contig_2590_408
Type: STP
Location: 449615 - 451159 (+)
Gene ID: A104_contig_2590_409
Type: TC
Location: 451180 - 452118 (+)
Gene ID: A104_contig_2590_410
Type: TC
Location: 452111 - 452977 (+)
Gene ID: A104_contig_2590_411
Type: CAZyme
Location: 453044 - 454534 (+)
Gene ID: A104_contig_2590_412
Type: CAZyme
Location: 454536 - 456113 (+)
Gene ID: A104_contig_2590_413
Type: CAZyme
Location: 456126 - 457394 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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