Cluster: A104.bin_19_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A104.bin_19
- CGC Family ID: CGCFAM_00200
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A104_contig_2590 | A104_contig_2590_209 | 210199 | 211911 | + | GH2 |
| pfam | A104_contig_2590 | A104_contig_2590_210 | 211972 | 213051 | + | Metallophos |
| pfam | A104_contig_2590 | A104_contig_2590_211 | 213211 | 214017 | + | PBP_like | PBP_like_2 | SBP_bac_11 |
| TC | A104_contig_2590 | A104_contig_2590_212 | 214326 | 215189 | + | 3.A.1.7.1 |
| TC | A104_contig_2590 | A104_contig_2590_213 | 215186 | 216046 | + | 3.A.1.7.2 |
| TC | A104_contig_2590 | A104_contig_2590_214 | 216043 | 216795 | + | 3.A.1.7.5 |
Gene ID: A104_contig_2590_209
Type: CAZyme
Location: 210199 - 211911 (+)
Type: CAZyme
Location: 210199 - 211911 (+)
Gene ID: A104_contig_2590_210
Type: pfam
Location: 211972 - 213051 (+)
Type: pfam
Location: 211972 - 213051 (+)
Gene ID: A104_contig_2590_211
Type: pfam
Location: 213211 - 214017 (+)
Type: pfam
Location: 213211 - 214017 (+)
Gene ID: A104_contig_2590_212
Type: TC
Location: 214326 - 215189 (+)
Type: TC
Location: 214326 - 215189 (+)
Gene ID: A104_contig_2590_213
Type: TC
Location: 215186 - 216046 (+)
Type: TC
Location: 215186 - 216046 (+)
Gene ID: A104_contig_2590_214
Type: TC
Location: 216043 - 216795 (+)
Type: TC
Location: 216043 - 216795 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp004558485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A104_contig_2590_211 | vegetarian > vegan | 1.04471 | 0.00229 |