Cluster: A104.bin_19_CGC16
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: A104.bin_19
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A104_contig_2590 | A104_contig_2590_106 | 110695 | 112974 | - | 3.A.1.137.2 |
| TC | A104_contig_2590 | A104_contig_2590_107 | 112987 | 113688 | - | 3.A.1.122.7 |
| pfam | A104_contig_2590 | A104_contig_2590_108 | 113980 | 114972 | + | Aminotran_4 |
| pfam | A104_contig_2590 | A104_contig_2590_109 | 114996 | 117092 | + | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| TC | A104_contig_2590 | A104_contig_2590_110 | 117128 | 118837 | + | 1.A.11.2.7 |
| peptidase | A104_contig_2590 | A104_contig_2590_111 | 119132 | 120712 | + | C44.001 |
| TC | A104_contig_2590 | A104_contig_2590_112 | 121120 | 122874 | + | 2.A.58.2.2 |
| pfam | A104_contig_2590 | A104_contig_2590_113 | 122889 | 123413 | + | ECF-ribofla_trS | ECF_trnsprt |
| TC | A104_contig_2590 | A104_contig_2590_114 | 123818 | 124669 | + | 3.A.1.24.5 |
| TC | A104_contig_2590 | A104_contig_2590_115 | 124737 | 125750 | + | 3.A.1.24.1 |
| TC | A104_contig_2590 | A104_contig_2590_116 | 125740 | 126453 | + | 3.A.1.24.5 |
| pfam | A104_contig_2590 | A104_contig_2590_117 | 126492 | 126959 | - | YpsA |
| CAZyme | A104_contig_2590 | A104_contig_2590_118 | 127200 | 128927 | + | GH123 |
Gene ID: A104_contig_2590_106
Type: TC
Location: 110695 - 112974 (-)
Type: TC
Location: 110695 - 112974 (-)
Gene ID: A104_contig_2590_107
Type: TC
Location: 112987 - 113688 (-)
Type: TC
Location: 112987 - 113688 (-)
Gene ID: A104_contig_2590_108
Type: pfam
Location: 113980 - 114972 (+)
Type: pfam
Location: 113980 - 114972 (+)
Gene ID: A104_contig_2590_109
Type: pfam
Location: 114996 - 117092 (+)
Type: pfam
Location: 114996 - 117092 (+)
Gene ID: A104_contig_2590_110
Type: TC
Location: 117128 - 118837 (+)
Type: TC
Location: 117128 - 118837 (+)
Gene ID: A104_contig_2590_111
Type: peptidase
Location: 119132 - 120712 (+)
Type: peptidase
Location: 119132 - 120712 (+)
Gene ID: A104_contig_2590_112
Type: TC
Location: 121120 - 122874 (+)
Type: TC
Location: 121120 - 122874 (+)
Gene ID: A104_contig_2590_113
Type: pfam
Location: 122889 - 123413 (+)
Type: pfam
Location: 122889 - 123413 (+)
Gene ID: A104_contig_2590_114
Type: TC
Location: 123818 - 124669 (+)
Type: TC
Location: 123818 - 124669 (+)
Gene ID: A104_contig_2590_115
Type: TC
Location: 124737 - 125750 (+)
Type: TC
Location: 124737 - 125750 (+)
Gene ID: A104_contig_2590_116
Type: TC
Location: 125740 - 126453 (+)
Type: TC
Location: 125740 - 126453 (+)
Gene ID: A104_contig_2590_117
Type: pfam
Location: 126492 - 126959 (-)
Type: pfam
Location: 126492 - 126959 (-)
Gene ID: A104_contig_2590_118
Type: CAZyme
Location: 127200 - 128927 (+)
Type: CAZyme
Location: 127200 - 128927 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp004558485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.