Cluster: A104.bin_19_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A104.bin_19
- CGC Family ID: CGCFAM_06506
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A104_contig_2590 | A104_contig_2590_21 | 28951 | 30903 | + | GH78 |
| NULL(UNKNOWN) | A104_contig_2590 | A104_contig_2590_22 | 31190 | 33250 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A104_contig_2590 | A104_contig_2590_23 | 33713 | 34804 | - | 9.A.5.3.1 |
| pfam | A104_contig_2590 | A104_contig_2590_24 | 34868 | 35134 | + | YabP |
| pfam | A104_contig_2590 | A104_contig_2590_25 | 35147 | 36343 | + | YqfD |
| CAZyme | A104_contig_2590 | A104_contig_2590_26 | 36421 | 39180 | + | GH89 |
Gene ID: A104_contig_2590_21
Type: CAZyme
Location: 28951 - 30903 (+)
Type: CAZyme
Location: 28951 - 30903 (+)
Gene ID: A104_contig_2590_22
Type:
Location: 31190 - 33250 (+)
Type:
Location: 31190 - 33250 (+)
Gene ID: A104_contig_2590_23
Type: TC
Location: 33713 - 34804 (-)
Type: TC
Location: 33713 - 34804 (-)
Gene ID: A104_contig_2590_24
Type: pfam
Location: 34868 - 35134 (+)
Type: pfam
Location: 34868 - 35134 (+)
Gene ID: A104_contig_2590_25
Type: pfam
Location: 35147 - 36343 (+)
Type: pfam
Location: 35147 - 36343 (+)
Gene ID: A104_contig_2590_26
Type: CAZyme
Location: 36421 - 39180 (+)
Type: CAZyme
Location: 36421 - 39180 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp004558485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.