Cluster: A104.bin_19_CGC1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: A104.bin_19
- CGC Family ID: CGCFAM_04218
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A104_contig_525 | A104_contig_525_29 | 33972 | 38279 | - | CE20 |
| pfam | A104_contig_525 | A104_contig_525_30 | 38307 | 39206 | - | Cohesin |
| CAZyme | A104_contig_525 | A104_contig_525_31 | 39254 | 41719 | - | CBM66 | GH43_32 |
| pfam | A104_contig_525 | A104_contig_525_32 | 41738 | 43591 | - | CBM9_1 | CBM9_1 | CBM9_1 |
| TC | A104_contig_525 | A104_contig_525_33 | 43606 | 44448 | - | 3.A.1.1.11 |
| TC | A104_contig_525 | A104_contig_525_34 | 44460 | 45365 | - | 3.A.1.1.18 |
| STP | A104_contig_525 | A104_contig_525_35 | 45385 | 46731 | - | SBP_bac_1 |
| CAZyme | A104_contig_525 | A104_contig_525_36 | 46752 | 48485 | - | GH2 |
| TF | A104_contig_525 | A104_contig_525_37 | 48482 | 49426 | - | HTH_5 |
| pfam | A104_contig_525 | A104_contig_525_38 | 50378 | 51070 | - | CpsB_CapC |
| TC | A104_contig_525 | A104_contig_525_39 | 51057 | 51767 | - | 8.A.3.2.1 |
Gene ID: A104_contig_525_29
Type: CAZyme
Location: 33972 - 38279 (-)
Type: CAZyme
Location: 33972 - 38279 (-)
Gene ID: A104_contig_525_30
Type: pfam
Location: 38307 - 39206 (-)
Type: pfam
Location: 38307 - 39206 (-)
Gene ID: A104_contig_525_31
Type: CAZyme
Location: 39254 - 41719 (-)
Type: CAZyme
Location: 39254 - 41719 (-)
Gene ID: A104_contig_525_32
Type: pfam
Location: 41738 - 43591 (-)
Type: pfam
Location: 41738 - 43591 (-)
Gene ID: A104_contig_525_33
Type: TC
Location: 43606 - 44448 (-)
Type: TC
Location: 43606 - 44448 (-)
Gene ID: A104_contig_525_34
Type: TC
Location: 44460 - 45365 (-)
Type: TC
Location: 44460 - 45365 (-)
Gene ID: A104_contig_525_35
Type: STP
Location: 45385 - 46731 (-)
Type: STP
Location: 45385 - 46731 (-)
Gene ID: A104_contig_525_36
Type: CAZyme
Location: 46752 - 48485 (-)
Type: CAZyme
Location: 46752 - 48485 (-)
Gene ID: A104_contig_525_37
Type: TF
Location: 48482 - 49426 (-)
Type: TF
Location: 48482 - 49426 (-)
Gene ID: A104_contig_525_38
Type: pfam
Location: 50378 - 51070 (-)
Type: pfam
Location: 50378 - 51070 (-)
Gene ID: A104_contig_525_39
Type: TC
Location: 51057 - 51767 (-)
Type: TC
Location: 51057 - 51767 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp004558485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.