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Cluster: A103.bin_16_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A103_contig_733 A103_contig_733_39 39908 42109 + GT2
pfam A103_contig_733 A103_contig_733_40 42170 43090 - DAGK_cat | YegS_C
pfam A103_contig_733 A103_contig_733_41 43328 44182 + PBP_like_2 | PBP_like_2
TC A103_contig_733 A103_contig_733_42 44265 45122 + 3.A.1.7.5
TC A103_contig_733 A103_contig_733_43 45146 45946 + 3.A.1.7.2
TC A103_contig_733 A103_contig_733_44 46087 46836 + 3.A.1.7.5
pfam A103_contig_733 A103_contig_733_45 46839 47522 + PhoU | PhoU
TC A103_contig_733 A103_contig_733_46 47700 49523 + 2.A.58.2.2
Gene ID: A103_contig_733_39
Type: CAZyme
Location: 39908 - 42109 (+)
Gene ID: A103_contig_733_40
Type: pfam
Location: 42170 - 43090 (-)
Gene ID: A103_contig_733_41
Type: pfam
Location: 43328 - 44182 (+)
Gene ID: A103_contig_733_42
Type: TC
Location: 44265 - 45122 (+)
Gene ID: A103_contig_733_43
Type: TC
Location: 45146 - 45946 (+)
Gene ID: A103_contig_733_44
Type: TC
Location: 46087 - 46836 (+)
Gene ID: A103_contig_733_45
Type: pfam
Location: 46839 - 47522 (+)
Gene ID: A103_contig_733_46
Type: TC
Location: 47700 - 49523 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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