Cluster: A103.bin_16_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: A103.bin_16
- CGC Family ID: CGCFAM_04210
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A103_contig_1197 | A103_contig_1197_62 | 62086 | 63639 | - | GH32 |
| pfam | A103_contig_1197 | A103_contig_1197_63 | 63654 | 64448 | - | YdjC |
| CAZyme | A103_contig_1197 | A103_contig_1197_64 | 64571 | 66082 | - | GH32 |
| TC | A103_contig_1197 | A103_contig_1197_65 | 66204 | 67061 | - | 3.A.1.1.45 |
| TC | A103_contig_1197 | A103_contig_1197_66 | 67061 | 67945 | - | 3.A.1.1.45 |
| STP | A103_contig_1197 | A103_contig_1197_67 | 68048 | 69343 | - | SBP_bac_1 |
| CAZyme | A103_contig_1197 | A103_contig_1197_68 | 69883 | 72105 | + | GH3 |
Gene ID: A103_contig_1197_62
Type: CAZyme
Location: 62086 - 63639 (-)
Type: CAZyme
Location: 62086 - 63639 (-)
Gene ID: A103_contig_1197_63
Type: pfam
Location: 63654 - 64448 (-)
Type: pfam
Location: 63654 - 64448 (-)
Gene ID: A103_contig_1197_64
Type: CAZyme
Location: 64571 - 66082 (-)
Type: CAZyme
Location: 64571 - 66082 (-)
Gene ID: A103_contig_1197_65
Type: TC
Location: 66204 - 67061 (-)
Type: TC
Location: 66204 - 67061 (-)
Gene ID: A103_contig_1197_66
Type: TC
Location: 67061 - 67945 (-)
Type: TC
Location: 67061 - 67945 (-)
Gene ID: A103_contig_1197_67
Type: STP
Location: 68048 - 69343 (-)
Type: STP
Location: 68048 - 69343 (-)
Gene ID: A103_contig_1197_68
Type: CAZyme
Location: 69883 - 72105 (+)
Type: CAZyme
Location: 69883 - 72105 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.