Cluster: A103.bin_16_CGC46
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: A103.bin_16
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A103_contig_926 | A103_contig_926_379 | 435641 | 437005 | + | 2.A.66.1.37 |
| peptidase | A103_contig_926 | A103_contig_926_380 | 437212 | 438189 | + | C59.951 |
| STP | A103_contig_926 | A103_contig_926_381 | 438368 | 439492 | + | Fer4 |
| CAZyme | A103_contig_926 | A103_contig_926_382 | 439600 | 441552 | + | GH127 |
| TC | A103_contig_926 | A103_contig_926_383 | 441848 | 443254 | + | 2.A.66.1.33 |
| pfam | A103_contig_926 | A103_contig_926_384 | 443396 | 443755 | - | CGGC |
| TC | A103_contig_926 | A103_contig_926_385 | 443773 | 444555 | - | 3.A.1.14.7 |
| TC | A103_contig_926 | A103_contig_926_386 | 444552 | 445628 | - | 3.A.1.14.20 |
| STP | A103_contig_926 | A103_contig_926_387 | 445646 | 446731 | - | Peripla_BP_2 |
| pfam | A103_contig_926 | A103_contig_926_388 | 447352 | 447627 | + | Isochorismatase |
| CAZyme | A103_contig_926 | A103_contig_926_389 | 447628 | 449397 | - | GH36 |
Gene ID: A103_contig_926_379
Type: TC
Location: 435641 - 437005 (+)
Type: TC
Location: 435641 - 437005 (+)
Gene ID: A103_contig_926_380
Type: peptidase
Location: 437212 - 438189 (+)
Type: peptidase
Location: 437212 - 438189 (+)
Gene ID: A103_contig_926_381
Type: STP
Location: 438368 - 439492 (+)
Type: STP
Location: 438368 - 439492 (+)
Gene ID: A103_contig_926_382
Type: CAZyme
Location: 439600 - 441552 (+)
Type: CAZyme
Location: 439600 - 441552 (+)
Gene ID: A103_contig_926_383
Type: TC
Location: 441848 - 443254 (+)
Type: TC
Location: 441848 - 443254 (+)
Gene ID: A103_contig_926_384
Type: pfam
Location: 443396 - 443755 (-)
Type: pfam
Location: 443396 - 443755 (-)
Gene ID: A103_contig_926_385
Type: TC
Location: 443773 - 444555 (-)
Type: TC
Location: 443773 - 444555 (-)
Gene ID: A103_contig_926_386
Type: TC
Location: 444552 - 445628 (-)
Type: TC
Location: 444552 - 445628 (-)
Gene ID: A103_contig_926_387
Type: STP
Location: 445646 - 446731 (-)
Type: STP
Location: 445646 - 446731 (-)
Gene ID: A103_contig_926_388
Type: pfam
Location: 447352 - 447627 (+)
Type: pfam
Location: 447352 - 447627 (+)
Gene ID: A103_contig_926_389
Type: CAZyme
Location: 447628 - 449397 (-)
Type: CAZyme
Location: 447628 - 449397 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A103_contig_926_379 | vegetarian > vegan | 1.28847 | 0.01591 |
| A103_contig_926_388 | vegetarian > vegan | 1.02158 | 0.01591 |