dbCAN Logo

Cluster: A103.bin_16_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A103_contig_926 A103_contig_926_351 407064 408764 + GH18
STP A103_contig_926 A103_contig_926_352 408782 409897 + PALP
CAZyme A103_contig_926 A103_contig_926_353 410070 411080 + GT2
pfam A103_contig_926 A103_contig_926_354 411210 412421 + GARS_A | ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | ATP-grasp_4
NULL(UNKNOWN) A103_contig_926 A103_contig_926_355 412409 412780 + NULL(UNKNOWN)
[View Structural Homologs]
TC A103_contig_926 A103_contig_926_356 412783 413118 + 2.A.7.33.5
CAZyme A103_contig_926 A103_contig_926_357 413158 413964 + CE4
Gene ID: A103_contig_926_351
Type: CAZyme
Location: 407064 - 408764 (+)
Gene ID: A103_contig_926_352
Type: STP
Location: 408782 - 409897 (+)
Gene ID: A103_contig_926_353
Type: CAZyme
Location: 410070 - 411080 (+)
Gene ID: A103_contig_926_354
Type: pfam
Location: 411210 - 412421 (+)
Gene ID: A103_contig_926_355
Type:
Location: 412409 - 412780 (+)
Gene ID: A103_contig_926_356
Type: TC
Location: 412783 - 413118 (+)
Gene ID: A103_contig_926_357
Type: CAZyme
Location: 413158 - 413964 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A103_contig_926_354 vegetarian > vegan 1.11152 0.01591

🧭 Explore Read Mapping of CGC

← Back to Cluster List