Cluster: A103.bin_16_CGC41
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: A103.bin_16
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A103_contig_926 | A103_contig_926_86 | 114819 | 116315 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | A103_contig_926 | A103_contig_926_87 | 116398 | 117444 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A103_contig_926 | A103_contig_926_88 | 117431 | 118501 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A103_contig_926 | A103_contig_926_89 | 118482 | 119633 | + | 9.B.34.1.3 |
| STP | A103_contig_926 | A103_contig_926_90 | 119922 | 120386 | - | NUDIX |
| CAZyme | A103_contig_926 | A103_contig_926_91 | 120491 | 122164 | - | GH13_31 |
| CAZyme | A103_contig_926 | A103_contig_926_92 | 122402 | 124075 | - | GH13_31 |
| TC | A103_contig_926 | A103_contig_926_93 | 124479 | 125366 | + | 3.A.1.26.7 |
| TC | A103_contig_926 | A103_contig_926_94 | 125356 | 126204 | + | 3.A.1.26.7 |
| TC | A103_contig_926 | A103_contig_926_95 | 126264 | 127100 | + | 3.A.1.25.4 |
Gene ID: A103_contig_926_86
Type: TC
Location: 114819 - 116315 (+)
Type: TC
Location: 114819 - 116315 (+)
Gene ID: A103_contig_926_87
Type:
Location: 116398 - 117444 (+)
Type:
Location: 116398 - 117444 (+)
Gene ID: A103_contig_926_88
Type:
Location: 117431 - 118501 (+)
Type:
Location: 117431 - 118501 (+)
Gene ID: A103_contig_926_89
Type: TC
Location: 118482 - 119633 (+)
Type: TC
Location: 118482 - 119633 (+)
Gene ID: A103_contig_926_90
Type: STP
Location: 119922 - 120386 (-)
Type: STP
Location: 119922 - 120386 (-)
Gene ID: A103_contig_926_91
Type: CAZyme
Location: 120491 - 122164 (-)
Type: CAZyme
Location: 120491 - 122164 (-)
Gene ID: A103_contig_926_92
Type: CAZyme
Location: 122402 - 124075 (-)
Type: CAZyme
Location: 122402 - 124075 (-)
Gene ID: A103_contig_926_93
Type: TC
Location: 124479 - 125366 (+)
Type: TC
Location: 124479 - 125366 (+)
Gene ID: A103_contig_926_94
Type: TC
Location: 125356 - 126204 (+)
Type: TC
Location: 125356 - 126204 (+)
Gene ID: A103_contig_926_95
Type: TC
Location: 126264 - 127100 (+)
Type: TC
Location: 126264 - 127100 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A103_contig_926_89 | vegetarian > vegan | 1.08052 | 0.01591 |
| A103_contig_926_90 | vegetarian > vegan | 2.06163 | 0.01591 |