Cluster: A103.bin_16_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A103.bin_16
- CGC Family ID: CGCFAM_00277
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A103_contig_269 | A103_contig_269_35 | 37873 | 39747 | + | 8.A.59.2.1 |
| TF | A103_contig_269 | A103_contig_269_36 | 39722 | 41344 | + | HTH_AraC |
| STP | A103_contig_269 | A103_contig_269_37 | 41487 | 42767 | + | SBP_bac_1 |
| TC | A103_contig_269 | A103_contig_269_38 | 42834 | 43700 | + | 3.A.1.1.37 |
| TC | A103_contig_269 | A103_contig_269_39 | 43713 | 44555 | + | 3.A.1.1.18 |
| CAZyme | A103_contig_269 | A103_contig_269_40 | 44570 | 46708 | + | GH2 |
Gene ID: A103_contig_269_35
Type: TC
Location: 37873 - 39747 (+)
Type: TC
Location: 37873 - 39747 (+)
Gene ID: A103_contig_269_36
Type: TF
Location: 39722 - 41344 (+)
Type: TF
Location: 39722 - 41344 (+)
Gene ID: A103_contig_269_37
Type: STP
Location: 41487 - 42767 (+)
Type: STP
Location: 41487 - 42767 (+)
Gene ID: A103_contig_269_38
Type: TC
Location: 42834 - 43700 (+)
Type: TC
Location: 42834 - 43700 (+)
Gene ID: A103_contig_269_39
Type: TC
Location: 43713 - 44555 (+)
Type: TC
Location: 43713 - 44555 (+)
Gene ID: A103_contig_269_40
Type: CAZyme
Location: 44570 - 46708 (+)
Type: CAZyme
Location: 44570 - 46708 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.