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Cluster: A103.bin_16_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A103_contig_329 A103_contig_329_34 41630 43507 + 8.A.59.2.1
TF A103_contig_329 A103_contig_329_35 43596 44333 + 0035607 | 0036286
STP A103_contig_329 A103_contig_329_36 44659 45957 + SBP_bac_1
TC A103_contig_329 A103_contig_329_37 46047 46940 + 3.A.1.1.17
TC A103_contig_329 A103_contig_329_38 46942 47820 + 3.A.1.1.18
CAZyme A103_contig_329 A103_contig_329_39 47871 49937 + GH31_5
pfam A103_contig_329 A103_contig_329_40 49976 51199 + Glyco_hydro_31_2nd | Gal_mutarotas_2
CAZyme A103_contig_329 A103_contig_329_41 51229 51960 + GH31_4
TC A103_contig_329 A103_contig_329_42 52052 52687 + 9.B.28.1.2
Gene ID: A103_contig_329_34
Type: TC
Location: 41630 - 43507 (+)
Gene ID: A103_contig_329_35
Type: TF
Location: 43596 - 44333 (+)
Gene ID: A103_contig_329_36
Type: STP
Location: 44659 - 45957 (+)
Gene ID: A103_contig_329_37
Type: TC
Location: 46047 - 46940 (+)
Gene ID: A103_contig_329_38
Type: TC
Location: 46942 - 47820 (+)
Gene ID: A103_contig_329_39
Type: CAZyme
Location: 47871 - 49937 (+)
Gene ID: A103_contig_329_40
Type: pfam
Location: 49976 - 51199 (+)
Gene ID: A103_contig_329_41
Type: CAZyme
Location: 51229 - 51960 (+)
Gene ID: A103_contig_329_42
Type: TC
Location: 52052 - 52687 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A103_contig_329_36 vegetarian > vegan 1.73094 0.01591
A103_contig_329_37 vegetarian > omnivore 1.31800 0.04774
A103_contig_329_37 vegetarian > vegan 1.08717 0.01591

🧭 Explore Read Mapping of CGC

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