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Cluster: A103.bin_16_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A103_contig_329 A103_contig_329_16 15898 16953 + 3.A.1.6.2
pfam A103_contig_329 A103_contig_329_17 17093 17779 + BPD_transp_1
TC A103_contig_329 A103_contig_329_18 17776 18423 + 3.A.1.6.2
TC A103_contig_329 A103_contig_329_19 19300 20649 + 2.A.66.1.28
TF A103_contig_329 A103_contig_329_20 20653 21483 + MerR
STP A103_contig_329 A103_contig_329_21 21934 22662 - AraC_binding
CAZyme A103_contig_329 A103_contig_329_22 22832 24139 + GH27
pfam A103_contig_329 A103_contig_329_23 24416 25426 + Asparaginase | Asparaginase_C
TC A103_contig_329 A103_contig_329_24 25522 27267 + 3.A.1.135.5
TC A103_contig_329 A103_contig_329_25 27264 29045 + 3.A.1.135.7
TC A103_contig_329 A103_contig_329_26 29140 30561 + 2.A.66.1.32
CAZyme A103_contig_329 A103_contig_329_27 30715 33474 - GH43_4
CAZyme A103_contig_329 A103_contig_329_28 34011 35192 + CE9
Gene ID: A103_contig_329_16
Type: TC
Location: 15898 - 16953 (+)
Gene ID: A103_contig_329_17
Type: pfam
Location: 17093 - 17779 (+)
Gene ID: A103_contig_329_18
Type: TC
Location: 17776 - 18423 (+)
Gene ID: A103_contig_329_19
Type: TC
Location: 19300 - 20649 (+)
Gene ID: A103_contig_329_20
Type: TF
Location: 20653 - 21483 (+)
Gene ID: A103_contig_329_21
Type: STP
Location: 21934 - 22662 (-)
Gene ID: A103_contig_329_22
Type: CAZyme
Location: 22832 - 24139 (+)
Gene ID: A103_contig_329_23
Type: pfam
Location: 24416 - 25426 (+)
Gene ID: A103_contig_329_24
Type: TC
Location: 25522 - 27267 (+)
Gene ID: A103_contig_329_25
Type: TC
Location: 27264 - 29045 (+)
Gene ID: A103_contig_329_26
Type: TC
Location: 29140 - 30561 (+)
Gene ID: A103_contig_329_27
Type: CAZyme
Location: 30715 - 33474 (-)
Gene ID: A103_contig_329_28
Type: CAZyme
Location: 34011 - 35192 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A103_contig_329_22 vegetarian > vegan 1.13162 0.01591
A103_contig_329_23 vegetarian > vegan 1.49213 0.01591

🧭 Explore Read Mapping of CGC

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