Cluster: A103.bin_16_CGC32
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: A103.bin_16
- CGC Family ID: CGCFAM_00046
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A103_contig_341 | A103_contig_341_273 | 320686 | 322641 | - | CBM48 | GH13_9 |
| CAZyme | A103_contig_341 | A103_contig_341_274 | 322782 | 324140 | - | GH13_20 |
| STP | A103_contig_341 | A103_contig_341_275 | 324251 | 324823 | - | TetR_N |
| NULL(UNKNOWN) | A103_contig_341 | A103_contig_341_276 | 326385 | 326570 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A103_contig_341 | A103_contig_341_277 | 331339 | 332448 | - | 3.A.1.1.26 |
| pfam | A103_contig_341 | A103_contig_341_278 | 332916 | 333860 | + | RNase_T |
| CAZyme | A103_contig_341 | A103_contig_341_279 | 334039 | 336519 | - | GT35 |
| pfam | A103_contig_341 | A103_contig_341_280 | 336565 | 339708 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| TC | A103_contig_341 | A103_contig_341_281 | 339967 | 340734 | + | 9.B.28.1.3 |
Gene ID: A103_contig_341_273
Type: CAZyme
Location: 320686 - 322641 (-)
Type: CAZyme
Location: 320686 - 322641 (-)
Gene ID: A103_contig_341_274
Type: CAZyme
Location: 322782 - 324140 (-)
Type: CAZyme
Location: 322782 - 324140 (-)
Gene ID: A103_contig_341_275
Type: STP
Location: 324251 - 324823 (-)
Type: STP
Location: 324251 - 324823 (-)
Gene ID: A103_contig_341_276
Type:
Location: 326385 - 326570 (-)
Type:
Location: 326385 - 326570 (-)
Gene ID: A103_contig_341_277
Type: TC
Location: 331339 - 332448 (-)
Type: TC
Location: 331339 - 332448 (-)
Gene ID: A103_contig_341_278
Type: pfam
Location: 332916 - 333860 (+)
Type: pfam
Location: 332916 - 333860 (+)
Gene ID: A103_contig_341_279
Type: CAZyme
Location: 334039 - 336519 (-)
Type: CAZyme
Location: 334039 - 336519 (-)
Gene ID: A103_contig_341_280
Type: pfam
Location: 336565 - 339708 (-)
Type: pfam
Location: 336565 - 339708 (-)
Gene ID: A103_contig_341_281
Type: TC
Location: 339967 - 340734 (+)
Type: TC
Location: 339967 - 340734 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.